RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 DCAF1Q9Y4B6 1507 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 A0A1B0GTW7 788 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 GRXCR1A8MXD5 290 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 AHRRA9YTQ3 701 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 RNASET2O00584 256 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 PLSCR1O15162 318 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 PHGDHO43175 533 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 CAND2O75155 1236 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 ERN1O75460 977 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 MATN4O95460 622 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 ZBED1O96006 694 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 ANXA1P04083 346 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 KRT18P05783 430 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 C1SP09871 688 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 FCER1AP12319 257 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 HDCP19113 662 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 ZNF135P52742 658 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 USP14P54578 494 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 FAM193AP78312 1265 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 HSD11B2P80365 405 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 MXRA7P84157 204 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 KIF22Q14807 665 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 RNF220Q5VTB9 566 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 METRNLQ641Q3 311 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 CCSAPQ6IQ19 270 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 DARS2Q6PI48 645 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 KSR2Q6VAB6 950 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 CHST15Q7LFX5 561 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 SPRED1Q7Z699 444 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 COL23A1Q86Y22 540 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 MAPKAPK5Q8IW41 473 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 ZFPM1Q8IX07 1006 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 ZNF276Q8N554 614 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 TMIEQ8NEW7 156 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 KLHL32Q96NJ5 620 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 PNKPQ96T60 521 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 TLR10Q9BXR5 811 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 TEX101Q9BY14 249 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 CEP72Q9P209 647 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 USP25Q9UHP3 1055 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 L1RE1Q9UN81 338 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 MTO1Q9Y2Z2 717 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 CHST2Q9Y4C5 530 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 FPGT-TNNI3KV9GXZ4 949 aa4.83□□□□□ -1.64
ECHDC1-217ENST00000488087 MGEA5O60502 916 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 NCR1O76036 304 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 GPANK1O95872 356 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 HLA-DOAP06340 250 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 KITP10721 976 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 RHCEP18577 417 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 FGFR4P22455 802 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 RHDQ02161 417 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 ZNF844Q08AG5 666 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 SPDYE7PQ495Y7 208 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 SWSAP1Q6NVH7 229 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 PDPRQ8NCN5 879 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 SLC25A43Q8WUT9 341 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 LRTOMTQ8WZ04 291 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 SCAMP4Q969E2 229 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 SLC46A2Q9BY10 475 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 SIK2Q9H0K1 926 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 ZNF768Q9H5H4 540 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 ZNF703Q9H7S9 590 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 AKIP1Q9NQ31 210 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 RNF181Q9P0P0 153 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 FAM50BQ9Y247 325 aa4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 REXO2Q9Y3B8 237 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.82□□□□□ -1.64
ECHDC1-217ENST00000488087 GAGE12BA1L429 117 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 GAGE12HA6NDE8 117 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 PRSS29PA6NIE9 313 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 M0QYG6 137 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 GOLIM4O00461 696 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 NDUFA10O95299 355 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 CHEK2O96017 543 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 HRGP04196 525 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 CENPBP07199 599 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 PEX2P28328 305 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 SLC7A1P30825 629 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 FAM189BP81408 668 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 OCA2Q04671 838 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 PIGFQ07326 219 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 SLFN5Q08AF3 891 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 GALEQ14376 348 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 HABP2Q14520 560 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 TIGD2Q4W5G0 525 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 COBLL1Q53SF7 1204 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 CRB2Q5IJ48 1285 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 EMC10Q5UCC4 262 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 USP37Q86T82 979 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 SYNE4Q8N205 404 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 NSUN7Q8NE18 718 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 IL31RAQ8NI17 732 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 RNF31Q96EP0 1072 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 P2RX7Q99572 595 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 SMOQ99835 787 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 C22orf23Q9BZE7 217 aa4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 TINAGL1Q9GZM7 467 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-217ENST00000488087 BHMT2Q9H2M3 363 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms