RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 SNW1Q13573 536 aaKnown RBP18.44■□□□□ 0.54
HMG20B-212ENST00000487894 SLC8B1Q6J4K2 584 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 HS2ST1Q7LGA3 356 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 C12orf56Q8IXR9 622 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 ZNF707Q96C28 371 aaPredicted RBP18.44■□□□□ 0.54
HMG20B-212ENST00000487894 FAM84AQ96KN4 292 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 PDE11AQ9HCR9 933 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 PTPRJQ12913 1337 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 CCDC195A0A1B0GUA6 201 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 ZNF233A6NK53 670 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 H7C4K7 107 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 ZMYND10O75800 440 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 CYP2J2P51589 502 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 TFAMQ00059 246 aaKnown RBP18.43■□□□□ 0.54
HMG20B-212ENST00000487894 ROR1Q01973 937 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 FAM160A1Q05DH4 1040 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 ATAT1Q5SQI0 421 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 ZNF280DQ6N043 979 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 DSTYKQ6XUX3 929 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 C1orf127Q8N9H9 656 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 APPL2Q8NEU8 664 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 RPGRIP1Q96KN7 1286 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 RHOBTB2Q9BYZ6 727 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 ZDHHC7Q9NXF8 308 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 CGNQ9P2M7 1197 aaKnown RBP18.43■□□□□ 0.54
HMG20B-212ENST00000487894 FBXL5Q9UKA1 691 aa18.43■□□□□ 0.54
HMG20B-212ENST00000487894 MYO10Q9HD67 2058 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 WDR27A2RRH5 827 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 SP100P23497 879 aaPredicted RBP18.42■□□□□ 0.54
HMG20B-212ENST00000487894 KCNB1Q14721 858 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 SNRNP35Q16560 246 aaKnown RBP18.42■□□□□ 0.54
HMG20B-212ENST00000487894 CTXN3Q4LDR2 81 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 LMBRD2Q68DH5 695 aaPredicted RBP18.42■□□□□ 0.54
HMG20B-212ENST00000487894 XXYLT1Q8NBI6 393 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 CXorf38Q8TB03 319 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 CCDC47Q96A33 483 aaKnown RBP18.42■□□□□ 0.54
HMG20B-212ENST00000487894 SENP8Q96LD8 212 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 MTMR12Q9C0I1 747 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 KCTD10Q9H3F6 313 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 KIAA1586Q9HCI6 787 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 CHMP5Q9NZZ3 219 aa18.42■□□□□ 0.54
HMG20B-212ENST00000487894 TIMM13Q9Y5L4 95 aaPredicted RBP18.42■□□□□ 0.54
HMG20B-212ENST00000487894 ITGB3P05106 788 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 C8AP07357 584 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 ODC1P11926 461 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 TYMPP19971 482 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 PAX3P23760 479 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 POLR2BP30876 1174 aaKnown RBP18.41■□□□□ 0.54
HMG20B-212ENST00000487894 TAF6P49848 677 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 YWHAHQ04917 246 aaPredicted RBP18.41■□□□□ 0.54
HMG20B-212ENST00000487894 PNOCQ13519 176 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 LIN9Q5TKA1 542 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 SCARA3Q6AZY7 606 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 CYP26C1Q6V0L0 522 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 GOLGA5Q8TBA6 731 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 SMG7Q92540 1137 aaKnown RBP18.41■□□□□ 0.54
HMG20B-212ENST00000487894 ZNF560Q96MR9 790 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 PRKD2Q9BZL6 878 aa18.41■□□□□ 0.54
HMG20B-212ENST00000487894 TULP1O00294 542 aaPredicted RBP18.4■□□□□ 0.54
HMG20B-212ENST00000487894 ABLIM3O94929 683 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 OAZ2O95190 189 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 TMEM191BP0C7N4 346 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 HOXA9P31269 272 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 CYP24A1Q07973 514 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 SURF1Q15526 300 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 SV2CQ496J9 727 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 RNF135Q8IUD6 432 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 RDH13Q8NBN7 331 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 OR5B17Q8NGF7 314 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 ZNF461Q8TAF7 563 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 SLC7A14Q8TBB6 771 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 CACTINQ8WUQ7 758 aaKnown RBP18.4■□□□□ 0.54
HMG20B-212ENST00000487894 BORCS6Q96GS4 357 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 CCDC34Q96HJ3 373 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 TSHZ2Q9NRE2 1034 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 INTS13Q9NVM9 706 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 SIX4Q9UIU6 781 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 ITGA11Q9UKX5 1188 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 NR2E1Q9Y466 385 aa18.4■□□□□ 0.54
HMG20B-212ENST00000487894 C2CD4DB7Z1M9 353 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 PDXKO00764 312 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 GADD45BO75293 160 aaPredicted RBP18.39■□□□□ 0.53
HMG20B-212ENST00000487894 CYP11A1P05108 521 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 HNRNPA1P09651 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
HMG20B-212ENST00000487894 ARPP19P56211 112 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 PSMD6Q15008 389 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 PPM1LQ5SGD2 360 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 OVOS1Q6IE37 1185 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 CCDC149Q6ZUS6 474 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 USP37Q86T82 979 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 WDR49Q8IV35 697 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 TMEM174Q8WUU8 243 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 ANKRD36BP1Q96IX9 119 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 TIGD1Q96MW7 591 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 CGRRF1Q99675 332 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 GZF1Q9H116 711 aaPredicted RBP18.39■□□□□ 0.53
HMG20B-212ENST00000487894 DMAC2Q9NW81 257 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 AGAP1Q9UPQ3 857 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 CLUHO75153 1309 aa18.39■□□□□ 0.53
HMG20B-212ENST00000487894 KPNA7A9QM74 516 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms