RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 ODC1P11926 461 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 PRKCSHP14314 528 aaPredicted RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 TKTP29401 623 aaKnown RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 GTF2H1P32780 548 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 LILRA4P59901 499 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 ERVFC1P60507 584 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 MYL6P60660 151 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 SMC1AQ14683 1233 aaKnown RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 BMS1Q14692 1282 aaKnown RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 ZNF699Q32M78 642 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 USP41Q3LFD5 358 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 CBWD6Q4V339 395 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 CBWD3Q5JTY5 395 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 CBWD5Q5RIA9 395 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 CD300LGQ6UXG3 332 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 TAS1R1Q7RTX1 841 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 IRF2BP1Q8IU81 584 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 MICALL1Q8N3F8 863 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 CXorf38Q8TB03 319 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 AUTS2Q8WXX7 1259 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 MYLIPQ8WY64 445 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 ZBP1Q9H171 429 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 CBX8Q9HC52 389 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 PCDHGC5Q9Y5F6 944 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
PRDM2-208ENST00000487453 VNN1O95497 513 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 CAVIN2O95810 425 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 HLA-DRAP01903 254 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TPM2P07951 284 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 CTSAP10619 480 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 PAX3P23760 479 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 EEF1GP26641 437 aaKnown RBP13.72□□□□□ -0.21
PRDM2-208ENST00000487453 IRS1P35568 1242 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 FMO5P49326 533 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TNNC1P63316 161 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TPM4P67936 248 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 KCNH2Q12809 1159 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TCP11X2Q5H9J9 407 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 RTP2Q5QGT7 225 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 CDKAL1Q5VV42 579 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 C15orf39Q6ZRI6 1047 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 LUZP1Q86V48 1076 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
PRDM2-208ENST00000487453 RNF168Q8IYW5 571 aaPredicted RBP13.72□□□□□ -0.21
PRDM2-208ENST00000487453 CCDC150Q8NCX0 1101 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 FBXL13Q8NEE6 735 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 ANKRD20A12PQ8NF67 263 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TAS1R2Q8TE23 839 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 RIN2Q8WYP3 895 aaPredicted RBP13.72□□□□□ -0.21
PRDM2-208ENST00000487453 ELMO3Q96BJ8 720 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 SENP8Q96LD8 212 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 CDX2Q99626 313 aaPredicted RBP13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TUBGCP2Q9BSJ2 902 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TTPALQ9BTX7 342 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 MRPL17Q9NRX2 175 aaKnown RBP13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TAB2Q9NYJ8 693 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 TIMM13Q9Y5L4 95 aaPredicted RBP13.72□□□□□ -0.21
PRDM2-208ENST00000487453 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 CHD7Q9P2D1 2997 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 VWA8A3KMH1 1905 aa13.72□□□□□ -0.21
PRDM2-208ENST00000487453 ARHGEF37A1IGU5 675 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 GOLGA6L19H0YKK7 550 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 CYB561D2O14569 222 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 SYN3O14994 580 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 HUS1O60921 280 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 EFEMP2O95967 443 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 FOSL2P15408 326 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 CDK11BP21127 795 aaKnown RBP13.71□□□□□ -0.21
PRDM2-208ENST00000487453 FGFR3P22607 806 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 ATICP31939 592 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 AARSP49588 968 aaKnown RBP eCLIP13.71□□□□□ -0.21
PRDM2-208ENST00000487453 ZNF445P59923 1031 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 CETN1Q12798 172 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 CAMK1Q14012 370 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 ADGRE1Q14246 886 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 NCAPHQ15003 741 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 PTPN14Q15678 1187 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 WDR72Q3MJ13 1102 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 PDE12Q6L8Q7 609 aaKnown RBP13.71□□□□□ -0.21
PRDM2-208ENST00000487453 PRSS55Q6UWB4 352 aaPredicted RBP13.71□□□□□ -0.21
PRDM2-208ENST00000487453 SCARA5Q6ZMJ2 495 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 APPL2Q8NEU8 664 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 GUCD1Q96NT3 240 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 MMS19Q96T76 1030 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 PI4K2AQ9BTU6 479 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 NGRNQ9NPE2 291 aaKnown RBP13.71□□□□□ -0.21
PRDM2-208ENST00000487453 RAB20Q9NX57 234 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 NXF1Q9UBU9 619 aaKnown RBP13.71□□□□□ -0.21
PRDM2-208ENST00000487453 SSX2IPQ9Y2D8 614 aa13.71□□□□□ -0.21
PRDM2-208ENST00000487453 SCN1AP35498 2009 aa13.71□□□□□ -0.22
PRDM2-208ENST00000487453 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms