RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 RIN2Q8WYP3 895 aaPredicted RBP12.59□□□□□ -0.39
CLIP2-207ENST00000487447 ZNF516Q92618 1163 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 ANKRD36BP1Q96IX9 119 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 MSLNLQ96KJ4 702 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 B3GALT6Q96L58 329 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 ZNF560Q96MR9 790 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 EMILIN2Q9BXX0 1053 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 MTMR12Q9C0I1 747 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 CLEC1BQ9P126 229 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 FRMD4BQ9Y2L6 1034 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 NUB1Q9Y5A7 615 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 HCFC2Q9Y5Z7 792 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 MYO7AQ13402 2215 aa12.58□□□□□ -0.39
CLIP2-207ENST00000487447 TRIM49BA6NDI0 452 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
CLIP2-207ENST00000487447 I3L4J1 428 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 BIN1O00499 593 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 IKBKBO14920 756 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 PER2O15055 1255 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 SLC16A3O15427 465 aaKnown RBP12.58□□□□□ -0.4
CLIP2-207ENST00000487447 TEX28O15482 410 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 LINC01565O15544 149 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 OAZ2O95190 189 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 CSPG5O95196 566 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 TNNC2P02585 160 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 TMEM191BP0C7N4 346 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 TYMPP19971 482 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
CLIP2-207ENST00000487447 PSMC2P35998 433 aaKnown RBP12.58□□□□□ -0.4
CLIP2-207ENST00000487447 TAF6P49848 677 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 CLCN4P51793 760 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 FKBP3Q00688 224 aaKnown RBP12.58□□□□□ -0.4
CLIP2-207ENST00000487447 BFSP1Q12934 665 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 ADAM9Q13443 819 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 PSMD5Q16401 504 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 SV2CQ496J9 727 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
CLIP2-207ENST00000487447 SCARA3Q6AZY7 606 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 ISM2Q6H9L7 571 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 SLC8B1Q6J4K2 584 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 KIAA1841Q6NSI8 718 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 LILRA6Q6PI73 481 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 ANKS3Q6ZW76 656 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 INTS8Q75QN2 995 aaKnown RBP12.58□□□□□ -0.4
CLIP2-207ENST00000487447 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 LIMS2Q7Z4I7 341 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 MLKLQ8NB16 471 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 FAM84AQ96KN4 292 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 FNBP1Q96RU3 617 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 TSG101Q99816 390 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 DUSP9Q99956 384 aaKnown RBP12.58□□□□□ -0.4
CLIP2-207ENST00000487447 CLSTN3Q9BQT9 956 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 VRTNQ9H8Y1 702 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 GDAP2Q9NXN4 497 aa12.58□□□□□ -0.4
CLIP2-207ENST00000487447 ARHGEF37A1IGU5 675 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 C2CD2LO14523 706 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 CETN3O15182 167 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 C4BPAP04003 597 aaKnown RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 ADH1AP07327 375 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 DLG4P78352 724 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 RBP5P82980 135 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 DLX2Q07687 328 aaPredicted RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 RAB33AQ14088 237 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 LEXMQ3ZCV2 418 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 ZACNQ401N2 412 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 CEP135Q66GS9 1140 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 LMBRD2Q68DH5 695 aaPredicted RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 PRSS55Q6UWB4 352 aaPredicted RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 RSPO2Q6UXX9 243 aaPredicted RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 RBM23Q86U06 439 aaKnown RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 FAM186BQ8IYM0 893 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 APPL2Q8NEU8 664 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 SPATA18Q8TC71 538 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 NOC3LQ8WTT2 800 aaKnown RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 HDAC7Q8WUI4 952 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 CASP10Q92851 521 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 KHSRPQ92945 711 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 SENP8Q96LD8 212 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 CEP63Q96MT8 703 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 MED15Q96RN5 788 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 POP1Q99575 1024 aaKnown RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 OXCT2Q9BYC2 517 aaPredicted RBP12.57□□□□□ -0.4
CLIP2-207ENST00000487447 CLDND1Q9NY35 253 aa12.57□□□□□ -0.4
CLIP2-207ENST00000487447 BICDL2A1A5D9 508 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 KPNA7A9QM74 516 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 SRGAP2BP0DMP2 458 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
CLIP2-207ENST00000487447 ODC1P11926 461 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 TNNI1P19237 187 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 VAMP7P51809 220 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 MARSP56192 900 aaKnown RBP12.56□□□□□ -0.4
CLIP2-207ENST00000487447 RBM10P98175 930 aaKnown RBP12.56□□□□□ -0.4
CLIP2-207ENST00000487447 PAK1Q13153 545 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 CT47A1Q5JQC4 288 aaPredicted RBP12.56□□□□□ -0.4
CLIP2-207ENST00000487447 TDRD10Q5VZ19 366 aaKnown RBP12.56□□□□□ -0.4
CLIP2-207ENST00000487447 USP37Q86T82 979 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 CSGALNACT2Q8N6G5 542 aa12.56□□□□□ -0.4
CLIP2-207ENST00000487447 NELFBQ8WX92 580 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms