RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 EPC2Q52LR7 807 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 C9orf57Q5W0N0 161 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 EHBP1Q8NDI1 1231 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-229ENST00000486665 LMO3Q8TAP4 145 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-229ENST00000486665 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 GRPEL1Q9HAV7 217 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.77□□□□□ -0.212e-7■■■■■ 33.6
HDAC6-229ENST00000486665 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 DNAJB4Q9UDY4 337 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 COQ4Q9Y3A0 265 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 P4HA2O15460 535 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 XPOTO43592 962 aaKnown RBP13.76□□□□□ -0.21
HDAC6-229ENST00000486665 N4BP1O75113 896 aaKnown RBP13.76□□□□□ -0.21
HDAC6-229ENST00000486665 KRT19P08727 400 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 IL9P15248 144 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 SLC9A1P19634 815 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 MYL6P60660 151 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 RBP5P82980 135 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 APBA1Q02410 837 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 NCOA4Q13772 614 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 BTG3Q14201 252 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-229ENST00000486665 DPY19L2P1Q6NXN4 242 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 GBP6Q6ZN66 633 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
HDAC6-229ENST00000486665 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 FAM193BQ96PV7 902 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-229ENST00000486665 PI4K2AQ9BTU6 479 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 RAB20Q9NX57 234 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 ITGA11Q9UKX5 1188 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 MRPL42Q9Y6G3 142 aaKnown RBP13.76□□□□□ -0.21
HDAC6-229ENST00000486665 CITO14578 2027 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 TRIP11Q15643 1979 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 RALGAPA2Q2PPJ7 1873 aa13.76□□□□□ -0.21
HDAC6-229ENST00000486665 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
HDAC6-229ENST00000486665 F8W810 466 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 PODXLO00592 558 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 SPTLC1O15269 473 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 GALTP07902 379 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 KCNA5P22460 613 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 PON1P27169 355 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
HDAC6-229ENST00000486665 PBX1P40424 430 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 PIK3CAP42336 1068 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 OR1G1P47890 313 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 SLC11A1P49279 550 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 ZNF75DP51815 510 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 TRPC3Q13507 836 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 SYCP1Q15431 976 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 UPP1Q16831 310 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 FKBP15Q5T1M5 1219 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 SPOPLQ6IQ16 392 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 LRRC43Q8N309 656 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 FBXL13Q8NEE6 735 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 TATDN2Q93075 761 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 MRPL9Q9BYD2 267 aaKnown RBP13.75□□□□□ -0.21
HDAC6-229ENST00000486665 TRIM5Q9C035 493 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 INTS2Q9H0H0 1204 aaKnown RBP13.75□□□□□ -0.21
HDAC6-229ENST00000486665 XYLT2Q9H1B5 865 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 APOBEC3GQ9HC16 384 aaKnown RBP13.75□□□□□ -0.21
HDAC6-229ENST00000486665 SIK3Q9Y2K2 1263 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 INSL6Q9Y581 213 aa13.75□□□□□ -0.21
HDAC6-229ENST00000486665 PI4K2BG5E9Z4 385 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 NRP1O14786 923 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 CBFA2T2O43439 604 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
HDAC6-229ENST00000486665 ALDH2P05091 517 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 PBX3P40426 434 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 BCAR1P56945 870 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 LRMPQ12912 555 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 EXOC3L4Q17RC7 722 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 SGSM1Q2NKQ1 1148 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 LEXMQ3ZCV2 418 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 TMEM31Q5JXX7 168 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
HDAC6-229ENST00000486665 HPDLQ96IR7 371 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 UROC1Q96N76 676 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 ERGIC2Q96RQ1 377 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 LSM14BQ9BX40 385 aaKnown RBP13.74□□□□□ -0.21
HDAC6-229ENST00000486665 SIX2Q9NPC8 291 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 GCNT4Q9P109 453 aa13.74□□□□□ -0.21
HDAC6-229ENST00000486665 PRG3Q9Y2Y8 225 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-229ENST00000486665 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-229ENST00000486665 TRIOO75962 3097 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 NT5C1B-RDH14C9J2C7 533 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 H3BQ06 376 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-229ENST00000486665 GPR37L1O60883 481 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 ASS1P00966 412 aaKnown RBP13.73□□□□□ -0.21
HDAC6-229ENST00000486665 ITGB1P05556 798 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-229ENST00000486665 LILRA4P59901 499 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 CETN1Q12798 172 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 SPOUT1Q5T280 376 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms