RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 HTR3DQ70Z44 454 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 PALM2Q8IXS6 379 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 AOPEPQ8N6M6 819 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 LRTOMTQ8WZ04 291 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 RSAD1Q9HA92 442 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 CFAP97Q9P2B7 532 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 SORCS3Q9UPU3 1222 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 GRIN2AQ12879 1464 aa7.49□□□□□ -1.21
RTN4-214ENST00000486085 CCDC194A0A1B0GVG4 234 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 GOLIM4O00461 696 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 APAF1O14727 1248 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 MUSKO15146 869 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 SAFBQ15424 915 aaKnown RBP eCLIP7.48□□□□□ -1.21
RTN4-214ENST00000486085 NOMO2Q5JPE7 1267 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 TSHZ3Q63HK5 1081 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 METRNLQ641Q3 311 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 APOA5Q6Q788 366 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 SLC17A8Q8NDX2 589 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 PJA1Q8NG27 643 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 PCGF6Q9BYE7 350 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 C22orf23Q9BZE7 217 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 REXO4Q9GZR2 422 aaKnown RBP7.48□□□□□ -1.21
RTN4-214ENST00000486085 ZDHHC8Q9ULC8 765 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 USP15Q9Y4E8 981 aaPredicted RBP7.48□□□□□ -1.21
RTN4-214ENST00000486085 GOLGA3Q08378 1498 aa7.48□□□□□ -1.21
RTN4-214ENST00000486085 CKBP12277 381 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 NPR1P16066 1061 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 PEX2P28328 305 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 MAGEA10P43363 369 aaPredicted RBP7.47□□□□□ -1.21
RTN4-214ENST00000486085 KCNJ5P48544 419 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 SOX8P57073 446 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 SEMA5AQ13591 1074 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 KIF22Q14807 665 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 PCSK9Q8NBP7 692 aaKnown RBP7.47□□□□□ -1.21
RTN4-214ENST00000486085 IL31RAQ8NI17 732 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 MRGPRX1Q96LB2 322 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 NEU1Q99519 415 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 APOL5Q9BWW9 433 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 IMPG2Q9BZV3 1241 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 TPCN1Q9ULQ1 816 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.47□□□□□ -1.212e-8■■■□□ 15.2
RTN4-214ENST00000486085 USP19O94966 1318 aa7.47□□□□□ -1.21
RTN4-214ENST00000486085 ZNF785A8K8V0 405 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 ZNF185O15231 689 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 MGEA5O60502 916 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 PQBP1O60828 265 aaKnown RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 SCAF4O95104 1147 aaKnown RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 MAP4K4O95819 1239 aaPredicted RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 NBPF7P0C2Y1 421 aaPredicted RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 RARBP10826 455 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 ACRV1P26436 265 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 SLC7A1P30825 629 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 FAM102AQ5T9C2 384 aaPredicted RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 ZFPM1Q8IX07 1006 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 TMIEQ8NEW7 156 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 CPT1CQ8TCG5 803 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 DVL3Q92997 716 aaPredicted RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 MARS2Q96GW9 593 aaKnown RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 KLHL32Q96NJ5 620 aa7.46□□□□□ -1.22
RTN4-214ENST00000486085 P2RX7Q99572 595 aaKnown RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 PIH1D1Q9NWS0 290 aaKnown RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 TTBK1Q5TCY1 1321 aaPredicted RBP7.46□□□□□ -1.22
RTN4-214ENST00000486085 PLIN1O60240 522 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 GCSHP23434 173 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 R3HDM1Q15032 1099 aaKnown RBP7.45□□□□□ -1.22
RTN4-214ENST00000486085 PDSS2Q86YH6 399 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 RHOT2Q8IXI1 618 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 NUP133Q8WUM0 1156 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 EXTL1Q92935 676 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 DCLRE1CQ96SD1 692 aaKnown RBP7.45□□□□□ -1.22
RTN4-214ENST00000486085 TLR10Q9BXR5 811 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 RLIMQ9NVW2 624 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 SLC52A1Q9NWF4 448 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 TRPM5Q9NZQ8 1165 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.45□□□□□ -1.22
RTN4-214ENST00000486085 ATP11BQ9Y2G3 1177 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 KIAA0586Q9BVV6 1533 aa7.45□□□□□ -1.22
RTN4-214ENST00000486085 CLASP1Q7Z460 1538 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 PLSCR1O15162 318 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 PMM2O15305 246 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 FAM20BO75063 409 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 RECQL4O94761 1208 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 ANXA1P04083 346 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 GNAI2P04899 355 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 MYF5P13349 255 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 ZNF135P52742 658 aaPredicted RBP7.44□□□□□ -1.22
RTN4-214ENST00000486085 SLFN5Q08AF3 891 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 POLD3Q15054 466 aaPredicted RBP7.44□□□□□ -1.22
RTN4-214ENST00000486085 PDCD4Q53EL6 469 aaKnown RBP7.44□□□□□ -1.22
RTN4-214ENST00000486085 CRB2Q5IJ48 1285 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 EMC10Q5UCC4 262 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 AGAP9Q5VTM2 703 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 IL31Q6EBC2 164 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 TMPRSS6Q8IU80 811 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 OR56A1Q8NGH5 318 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 ANKS1AQ92625 1134 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 SCAMP4Q969E2 229 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 CDK5RAP1Q96SZ6 601 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms