RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SLC26A6Q9BXS9 759 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 DNAI2Q9GZS0 605 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 TSPYL1Q9H0U9 437 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 NCOA5Q9HCD5 579 aaKnown RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 ECHDC1Q9NTX5 307 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 SPTLC3Q9NUV7 552 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 PIH1D1Q9NWS0 290 aaKnown RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 MKS1Q9NXB0 559 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 SEPT10Q9P0V9 454 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 CLEC1BQ9P126 229 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 SRRDQ9UH36 339 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 DBR1Q9UK59 544 aaKnown RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 MTMR6Q9Y217 621 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 BACE2Q9Y5Z0 518 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 MED23Q9ULK4 1368 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 RGPD8O14715 1765 aaPredicted RBP4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 AK9Q5TCS8 1911 aa4.42□□□□□ -1.7
PRPF38B-205ENST00000485810 ANKRD34BA5PLL1 514 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 B2RBV5 119 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 MATN3O15232 486 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PMM2O15305 246 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 RNMTO43148 476 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 TLR5O60602 858 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 MTRF1O75570 445 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 CAVIN2O95810 425 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 CYBBP04839 570 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 ITGB3P05106 788 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 MTHFD1P11586 935 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 SKILP12757 684 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 RPS2P15880 293 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PDCP20941 246 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PSMA5P28066 241 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 EVCP57679 992 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 ADAM17P78536 824 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 SARNPP82979 210 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 CACNB2Q08289 660 aaPredicted RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 SSRP1Q08945 709 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 CCDC15Q0P6D6 951 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 TEFQ10587 303 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 GBX1Q14549 363 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 MYBPC3Q14896 1274 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 TNIP1Q15025 636 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 ANKRD1Q15327 319 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PKN2Q16513 984 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PRR16Q569H4 304 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 UBXN11Q5T124 520 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 GPR158Q5T848 1215 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 MBLAC2Q68D91 279 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 RCSD1Q6JBY9 416 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 RETSATQ6NUM9 610 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 XRRA1Q6P2D8 792 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PLBD1Q6P4A8 553 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PAQR3Q6TCH7 311 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 SASS6Q6UVJ0 657 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 RBM43Q6ZSC3 357 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 SLC44A2Q8IWA5 706 aaPredicted RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 JMYQ8N9B5 988 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 TDRD7Q8NHU6 1098 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 UHMK1Q8TAS1 419 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 BICD2Q8TD16 824 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PIBF1Q8WXW3 757 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 CLIP3Q96DZ5 547 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 SEC62Q99442 399 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 UPF3BQ9BZI7 483 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 IQCGQ9H095 443 aaKnown RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 LMAN2LQ9H0V9 348 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 CCDC8Q9H0W5 538 aaPredicted RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 IL1RAPL2Q9NP60 686 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 DDX21Q9NR30 783 aaKnown RBP eCLIP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 TOPORSQ9NS56 1045 aaPredicted RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 RRN3Q9NYV6 651 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 ACTR10Q9NZ32 417 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 HMG20BQ9P0W2 317 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 WDR35Q9P2L0 1181 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 MTRRQ9UBK8 725 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 PFDN2Q9UHV9 154 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 SIT1Q9Y3P8 196 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 TRIM17Q9Y577 477 aa4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 SIPA1L3O60292 1781 aaPredicted RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 NPHP4O75161 1426 aaPredicted RBP4.41□□□□□ -1.7
PRPF38B-205ENST00000485810 NPHP3-ACAD11A0A0J9YXS1 232 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 H0YC42 278 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 GRM8O00222 908 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 CASQ2O14958 399 aaPredicted RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 RASA4O43374 803 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 TBX1O43435 398 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 DDX58O95786 925 aaKnown RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 PLS3P13797 630 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 FERP16591 822 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ZKSCAN1P17029 563 aaPredicted RBP4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 PFKLP17858 780 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 MUTP22033 750 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ENPP1P22413 925 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 HSPA1LP34931 641 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 GRK6P43250 576 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 MAGEA8P43361 318 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 MPP1Q00013 466 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 MECOMQ03112 1051 aa4.4□□□□□ -1.7
PRPF38B-205ENST00000485810 ST3GAL1Q11201 340 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms