RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 SPDYAQ5MJ70 313 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 DUPD1Q68J44 220 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 OR52E8Q6IFG1 317 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 PIK3AP1Q6ZUJ8 805 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 SLFN11Q7Z7L1 901 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 LCA5Q86VQ0 697 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 PCSK9Q8NBP7 692 aaKnown RBP10.77□□□□□ -0.68
APTX-226ENST00000483148 CHST13Q8NET6 341 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 KCNV2Q8TDN2 545 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 CLEC4DQ8WXI8 215 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 PLEKHG4BQ96PX9 1271 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 TSG101Q99816 390 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 TIPINQ9BVW5 301 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 TRIM9Q9C026 710 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 DDX47Q9H0S4 455 aaKnown RBP10.77□□□□□ -0.68
APTX-226ENST00000483148 C11orf16Q9NQ32 467 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.77□□□□□ -0.68
APTX-226ENST00000483148 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.77□□□□□ -0.68
APTX-226ENST00000483148 BARHL2Q9NY43 387 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 KLHL14Q9P2G3 628 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 LARSQ9P2J5 1176 aaKnown RBP10.77□□□□□ -0.68
APTX-226ENST00000483148 RASAL2Q9UJF2 1139 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 PCDHA1Q9Y5I3 950 aa10.77□□□□□ -0.68
APTX-226ENST00000483148 PVALEFA0A1B0GWK0 134 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 ZSCAN9O15535 394 aaPredicted RBP10.77□□□□□ -0.69
APTX-226ENST00000483148 TTI1O43156 1089 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 TLL1O43897 1013 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 SKIP12755 728 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 ALAS1P13196 640 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 RASSF2P50749 326 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 DNA2P51530 1060 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 ASIC2Q16515 512 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 GUF1Q8N442 669 aaKnown RBP10.77□□□□□ -0.69
APTX-226ENST00000483148 KIF2BQ8N4N8 673 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 METTL13Q8N6R0 699 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 LRRC57Q8N9N7 239 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 SLC43A3Q8NBI5 491 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 ATP8B4Q8TF62 1192 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 DYDC1Q8WWB3 177 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 TBC1D5Q92609 795 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 GPKOWQ92917 476 aaPredicted RBP eCLIP10.77□□□□□ -0.699e-6■■□□□ 14.5
APTX-226ENST00000483148 FAM136AQ96C01 138 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 RUNDC3BQ96NL0 473 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
APTX-226ENST00000483148 EPB41L4BQ9H329 900 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 RIC8AQ9NPQ8 531 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 SH3GLB2Q9NR46 395 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 RNF146Q9NTX7 359 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 ZDHHC18Q9NUE0 388 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 DLGAP2Q9P1A6 1054 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 STOML1Q9UBI4 398 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 FBXO40Q9UH90 709 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 INTUQ9ULD6 942 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 PACSIN2Q9UNF0 486 aaPredicted RBP10.77□□□□□ -0.69
APTX-226ENST00000483148 ARIH1Q9Y4X5 557 aaPredicted RBP10.77□□□□□ -0.69
APTX-226ENST00000483148 GMEB1Q9Y692 573 aa10.77□□□□□ -0.69
APTX-226ENST00000483148 PRRC2BQ5JSZ5 2229 aaKnown RBP10.76□□□□□ -0.69
APTX-226ENST00000483148 ASTN1O14525 1302 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 MAGEA13PA6NCF6 341 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 EPOPA6NHQ4 379 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 NFIBO00712 420 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 TLR3O15455 904 aaKnown RBP10.76□□□□□ -0.69
APTX-226ENST00000483148 HNRNPCL1O60812 293 aaKnown RBP10.76□□□□□ -0.69
APTX-226ENST00000483148 POLE2P56282 527 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 PTENP60484 403 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 ASIC1P78348 528 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 GHRHRQ02643 423 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 KLHL30Q0D2K2 578 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 KCNMA1Q12791 1236 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 STK4Q13043 487 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
APTX-226ENST00000483148 HEATR3Q7Z4Q2 680 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 CKAP2Q8WWK9 683 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 NCSTNQ92542 709 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 RPS6KC1Q96S38 1066 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 ERP44Q9BS26 406 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 AP1M1Q9BXS5 423 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 MAF1Q9H063 256 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 KATNBL1Q9H079 304 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 TRPV6Q9H1D0 765 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 WNT8AQ9H1J5 351 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 HIPK3Q9H422 1215 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 DCLRE1BQ9H816 532 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 ACAD9Q9H845 621 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 PIDD1Q9HB75 910 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 ETNK1Q9HBU6 452 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 HOMER2Q9NSB8 354 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 PCMTD2Q9NV79 361 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 MTRF1LQ9UGC7 380 aaKnown RBP10.76□□□□□ -0.69
APTX-226ENST00000483148 MRPL11Q9Y3B7 192 aaKnown RBP10.76□□□□□ -0.69
APTX-226ENST00000483148 MTCH2Q9Y6C9 303 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 MCM3APO60318 1980 aa10.76□□□□□ -0.69
APTX-226ENST00000483148 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.75□□□□□ -0.69
APTX-226ENST00000483148 TLDC2A0PJX2 215 aa10.75□□□□□ -0.69
APTX-226ENST00000483148 TCP11X1B4DZS4 312 aa10.75□□□□□ -0.69
APTX-226ENST00000483148 NVLO15381 856 aaKnown RBP10.75□□□□□ -0.69
APTX-226ENST00000483148 GNA14O95837 355 aa10.75□□□□□ -0.69
APTX-226ENST00000483148 SHBGP04278 402 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms