RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 NTHL1P78549 312 aa16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 DNM1Q05193 864 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 CNNM4Q6P4Q7 775 aa16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 CYP4F11Q9HBI6 524 aa16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 DNMT3BQ9UBC3 853 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 AFF4Q9UHB7 1163 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 CDH7Q9ULB5 785 aa16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 TIMM13Q9Y5L4 95 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-205ENST00000482614 TRIOO75962 3097 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 PPEF2O14830 753 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 POLR2DO15514 142 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 PRPF6O94906 941 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 CPB1P15086 417 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 PTPN2P17706 415 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 PABPC1LQ4VXU2 614 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 RESP18Q5W5W9 173 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 RSAD2Q8WXG1 361 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 SENP8Q96LD8 212 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 PRRX2Q99811 253 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 PYM1Q9BRP8 204 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 FAM213AQ9BRX8 229 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 FGFBP2Q9BYJ0 223 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 HCFC1R1Q9NWW0 138 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 DPP3Q9NY33 737 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 KCNH3Q9ULD8 1083 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 ZNF318Q5VUA4 2279 aa16.62■□□□□ 0.25
EXOSC3-205ENST00000482614 OR6C75A6NL08 312 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 ANHXE9PGG2 379 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 KIAA0391O15091 583 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 SEC24AO95486 1093 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 PDGFBP01127 241 aaPredicted RBP16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 ODC1P11926 461 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 AVPR2P30518 371 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 ASIC1P78348 528 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 ADCY1Q08828 1119 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 OVOS1Q6IE37 1185 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 BRSK2Q8IWQ3 736 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 ELMOD1Q8N336 334 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 SLC44A3Q8N4M1 653 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 FGF13Q92913 245 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 AVENQ9NQS1 362 aaPredicted RBP16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 INSL5Q9Y5Q6 135 aa16.61■□□□□ 0.25
EXOSC3-205ENST00000482614 NOTCH4Q99466 2003 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 SPTLC1O15269 473 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 EIF3DO15371 548 aaKnown RBP eCLIP16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 EXTL3O43909 919 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 RHOP08100 348 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 TAF6P49848 677 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 HTR4Q13639 388 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 MYBPC2Q14324 1141 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 ARMCX5Q6P1M9 558 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 RNF19BQ6ZMZ0 732 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 EFCAB13Q8IY85 973 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 ITFG1Q8TB96 612 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 CACTINQ8WUQ7 758 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 MFSD1Q9H3U5 465 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 FBXL21Q9UKT6 434 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 MRPS23Q9Y3D9 190 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 KMT2EQ8IZD2 1858 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 SCN1AP35498 2009 aa16.6■□□□□ 0.25
EXOSC3-205ENST00000482614 NARSO43776 548 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 CYP11A1P05108 521 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 SRFP11831 508 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 NUBP1P53384 320 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 VCPP55072 806 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 GPR17Q13304 367 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 FAM26FQ5R3K3 315 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 UNC13DQ70J99 1090 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 MTSS1LQ765P7 747 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 METTL23Q86XA0 190 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 GPD1LQ8N335 351 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 ZNF507Q8TCN5 953 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 HPS3Q969F9 1004 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 CBWD1Q9BRT8 395 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 PCIF1Q9H4Z3 704 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 RBAKQ9NYW8 714 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 WNT16Q9UBV4 365 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 DSEQ9UL01 958 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 NUMBLQ9Y6R0 609 aa16.59■□□□□ 0.25
EXOSC3-205ENST00000482614 TCHHQ07283 1943 aa16.58■□□□□ 0.25
EXOSC3-205ENST00000482614 GOLGA8IPA6NC78 632 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 GOLGA8JA6NMD2 632 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 TULP1O00294 542 aaPredicted RBP16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 CYB561D2O14569 222 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 ZNF197O14709 1029 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 PNPLA4P41247 253 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 CLCN5P51795 746 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 TFAMQ00059 246 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 SV2CQ496J9 727 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 IER5LQ5T953 404 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 IQCEQ6IPM2 695 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 CEP57L1Q8IYX8 460 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 GLIS3Q8NEA6 775 aa16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-205ENST00000482614 ZNF512Q96ME7 567 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms