RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CYP11B2P19099 503 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 CSRP1P21291 193 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 NAMPTP43490 491 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 GUCY1B3Q02153 619 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 CREB5Q02930 508 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 ST3GAL1Q11201 340 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 ELAVL2Q12926 359 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 RAB33AQ14088 237 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 TRIM29Q14134 588 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 PON2Q15165 354 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 UVSSAQ2YD98 709 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 PLK5Q496M5 336 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 DEPTORQ8TB45 409 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 SMARCD2Q92925 531 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 ADPGKQ9BRR6 497 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 CDY1Q9Y6F8 540 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 ADAMTS20P59510 1910 aa10.36□□□□□ -0.75
SMARCE1-210ENST00000481231 EIF4E1BA6NMX2 242 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 SPECC1L-ADORA2AF8WAN1 911 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 DCLK1O15075 740 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 B3GAT3O94766 335 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 CAVIN2O95810 425 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 GJA1P17302 382 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 PTPN2P17706 415 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 FGFR3P22607 806 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 RPA1P27694 616 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 CCINQ13939 588 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 UAP1L1Q3KQV9 507 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 DCAF4L1Q3SXM0 396 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 GLRA4Q5JXX5 417 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 DGKKQ5KSL6 1271 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 NT5DC1Q5TFE4 455 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 PDXDC1Q6P996 788 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 ERMNQ8TAM6 284 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 CSGALNACT1Q8TDX6 532 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 DEPDC1BQ8WUY9 529 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 RSPRY1Q96DX4 576 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 ZC3H10Q96K80 434 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 PPP1R10Q96QC0 940 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 DUSP15Q9H1R2 295 aaPredicted RBP10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 POLD4Q9HCU8 107 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 TMEM9BQ9NQ34 198 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 AVENQ9NQS1 362 aaPredicted RBP10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 ANKFY1Q9P2R3 1169 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 MTRRQ9UBK8 725 aa10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-210ENST00000481231 SPAARA0A1B0GVQ0 90 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 HEPACAM2A8MVW5 462 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 PATE3B3GLJ2 98 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 TMEM189-UBE2V1I3L0A0 370 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 I3L4J1 428 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 CDX4O14627 284 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 LRG1P02750 347 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 CAPNS1P04632 268 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 OR52Z1P0C646 297 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 TKTP29401 623 aaKnown RBP10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 CTHP32929 405 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 EFNA5P52803 228 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 PPP2R5AQ15172 486 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 SAFBQ15424 915 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 ZNF174Q15697 407 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 ECM1Q16610 540 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 ATF7IP2Q5U623 682 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 CD300LGQ6UXG3 332 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 PDZD4Q76G19 769 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 ZSCAN18Q8TBC5 510 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 FAM200AQ8TCP9 573 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 DDX27Q96GQ7 796 aaKnown RBP10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 ZFYVE19Q96K21 471 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 MKNK1Q9BUB5 465 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 BACE2Q9Y5Z0 518 aa10.34□□□□□ -0.75
SMARCE1-210ENST00000481231 BCLAF3A2AJT9 711 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 MYBPHLA2RUH7 354 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 PRRG1O14668 218 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 MOSPD3O75425 235 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 PRB1P04280 392 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 CLCNKBP51801 687 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 NEK4P51957 841 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 SIM1P81133 766 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 ORC2Q13416 577 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 ELF2Q15723 593 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 UPP1Q16831 310 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 MFSD6LQ8IWD5 586 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 CEP120Q8N960 986 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 HNRNPLLQ8WVV9 542 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 KIFAP3Q92845 792 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 MSANTD3Q96H12 275 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 IFT74Q96LB3 600 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 HHIPQ96QV1 700 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 BHMT2Q9H2M3 363 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 C8orf33Q9H7E9 229 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 GOLGA2P5Q9HBQ8 144 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 GTSE1Q9NYZ3 720 aa10.33□□□□□ -0.76
SMARCE1-210ENST00000481231 CCDC163A0A0D9SF12 145 aa10.32□□□□□ -0.76
SMARCE1-210ENST00000481231 SMIM28A0A1B0GU29 152 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms