RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 RRAGBQ5VZM2 374 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 LETMD1Q6P1Q0 360 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 IYDQ6PHW0 289 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 CRTC1Q6UUV9 634 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 DIS3L2Q8IYB7 885 aaKnown RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 TMEM57Q8N5G2 664 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 PIGOQ8TEQ8 1089 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 ISL2Q96A47 359 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 KLHDC7BQ96G42 594 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 EPB41L4AQ9HCS5 686 aaPredicted RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 SSU72Q9NP77 194 aaKnown RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 PI4KBQ9UBF8 816 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 ATXN7L1Q9ULK2 861 aaPredicted RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 DUSP12Q9UNI6 340 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 TIMM13Q9Y5L4 95 aaPredicted RBP8.84□□□□□ -0.99
LSM5-210ENST00000480956 PIAS3Q9Y6X2 628 aa8.84□□□□□ -0.99
LSM5-210ENST00000480956 PSMA7O14818 248 aa8.83□□□□□ -1
LSM5-210ENST00000480956 VILLO15195 856 aa8.83□□□□□ -1
LSM5-210ENST00000480956 ENDOD1O94919 500 aa8.83□□□□□ -1
LSM5-210ENST00000480956 APOL3O95236 402 aa8.83□□□□□ -1
LSM5-210ENST00000480956 HLA-DPA1P20036 260 aa8.83□□□□□ -1
LSM5-210ENST00000480956 AP2B1P63010 937 aa8.83□□□□□ -1
LSM5-210ENST00000480956 SUZ12Q15022 739 aaKnown RBP8.83□□□□□ -1
LSM5-210ENST00000480956 GPR68Q15743 365 aa8.83□□□□□ -1
LSM5-210ENST00000480956 DUSP28Q4G0W2 176 aa8.83□□□□□ -1
LSM5-210ENST00000480956 ARL6IP4Q66PJ3 421 aaKnown RBP8.83□□□□□ -1
LSM5-210ENST00000480956 MBLAC2Q68D91 279 aa8.83□□□□□ -1
LSM5-210ENST00000480956 DTWD2Q8NBA8 298 aa8.83□□□□□ -1
LSM5-210ENST00000480956 CCDC150Q8NCX0 1101 aa8.83□□□□□ -1
LSM5-210ENST00000480956 OR6Y1Q8NGX8 325 aa8.83□□□□□ -1
LSM5-210ENST00000480956 USP6NLQ92738 828 aa8.83□□□□□ -1
LSM5-210ENST00000480956 METTL22Q9BUU2 404 aaPredicted RBP8.83□□□□□ -1
LSM5-210ENST00000480956 MAGEB5Q9BZ81 275 aa8.83□□□□□ -1
LSM5-210ENST00000480956 DNAI2Q9GZS0 605 aa8.83□□□□□ -1
LSM5-210ENST00000480956 RC3H2Q9HBD1 1191 aaKnown RBP8.83□□□□□ -1
LSM5-210ENST00000480956 ADPRHL2Q9NX46 363 aa8.83□□□□□ -1
LSM5-210ENST00000480956 RGL1Q9NZL6 768 aa8.83□□□□□ -1
LSM5-210ENST00000480956 MORF4L1Q9UBU8 362 aa8.83□□□□□ -1
LSM5-210ENST00000480956 FBXL5Q9UKA1 691 aa8.83□□□□□ -1
LSM5-210ENST00000480956 PCDHA6Q9UN73 950 aa8.83□□□□□ -1
LSM5-210ENST00000480956 ZNF281Q9Y2X9 895 aa8.83□□□□□ -1
LSM5-210ENST00000480956 DTNAQ9Y4J8 743 aa8.83□□□□□ -1
LSM5-210ENST00000480956 BTBD11A6QL63 1104 aa8.83□□□□□ -1
LSM5-210ENST00000480956 GPR25O00155 361 aa8.83□□□□□ -1
LSM5-210ENST00000480956 SIN3BO75182 1162 aa8.83□□□□□ -1
LSM5-210ENST00000480956 LRRN2O75325 713 aa8.83□□□□□ -1
LSM5-210ENST00000480956 DLGAP3O95886 979 aa8.83□□□□□ -1
LSM5-210ENST00000480956 CCDC159P0C7I6 412 aa8.83□□□□□ -1
LSM5-210ENST00000480956 GSPT1P15170 499 aaKnown RBP8.83□□□□□ -1
LSM5-210ENST00000480956 BCL6P41182 706 aa8.83□□□□□ -1
LSM5-210ENST00000480956 MCAMP43121 646 aa8.83□□□□□ -1
LSM5-210ENST00000480956 RAC1P63000 192 aa8.83□□□□□ -1
LSM5-210ENST00000480956 KIAA2012Q0VF49 1180 aa8.83□□□□□ -1
LSM5-210ENST00000480956 AIMP1Q12904 312 aaKnown RBP8.83□□□□□ -1
LSM5-210ENST00000480956 TMED1Q13445 227 aa8.83□□□□□ -1
LSM5-210ENST00000480956 ADIPOQQ15848 244 aa8.83□□□□□ -1
LSM5-210ENST00000480956 BAK1Q16611 211 aa8.83□□□□□ -1
LSM5-210ENST00000480956 KYNUQ16719 465 aa8.83□□□□□ -1
LSM5-210ENST00000480956 KHDC1LQ5JSQ8 128 aa8.83□□□□□ -1
LSM5-210ENST00000480956 FYB2Q5VWT5 728 aa8.83□□□□□ -1
LSM5-210ENST00000480956 DCLRE1AQ6PJP8 1040 aa8.83□□□□□ -1
LSM5-210ENST00000480956 NBPF5PQ86XG9 351 aaPredicted RBP8.83□□□□□ -1
LSM5-210ENST00000480956 CELF5Q8N6W0 485 aaKnown RBP8.83□□□□□ -1
LSM5-210ENST00000480956 CSGALNACT1Q8TDX6 532 aa8.83□□□□□ -1
LSM5-210ENST00000480956 MIPEPQ99797 713 aa8.83□□□□□ -1
LSM5-210ENST00000480956 ABHD16BQ9H3Z7 469 aa8.83□□□□□ -1
LSM5-210ENST00000480956 NOD2Q9HC29 1040 aa8.83□□□□□ -1
LSM5-210ENST00000480956 PRDM8Q9NQV8 689 aa8.83□□□□□ -1
LSM5-210ENST00000480956 TBCCD1Q9NVR7 557 aa8.83□□□□□ -1
LSM5-210ENST00000480956 HS3ST4Q9Y661 456 aa8.83□□□□□ -1
LSM5-210ENST00000480956 CDC14CA4D256 554 aa8.82□□□□□ -1
LSM5-210ENST00000480956 H7C1W4 665 aa8.82□□□□□ -1
LSM5-210ENST00000480956 SH2B2O14492 632 aaPredicted RBP8.82□□□□□ -1
LSM5-210ENST00000480956 CAPN9O14815 690 aa8.82□□□□□ -1
LSM5-210ENST00000480956 FMO6PO60774 539 aa8.82□□□□□ -1
LSM5-210ENST00000480956 RNGTTO60942 597 aaKnown RBP8.82□□□□□ -1
LSM5-210ENST00000480956 IFNAR1P17181 557 aa8.82□□□□□ -1
LSM5-210ENST00000480956 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
LSM5-210ENST00000480956 EIF2DP41214 584 aaKnown RBP8.82□□□□□ -1
LSM5-210ENST00000480956 PRPHP41219 470 aa8.82□□□□□ -1
LSM5-210ENST00000480956 RAD23AP54725 363 aa8.82□□□□□ -1
LSM5-210ENST00000480956 RPL11P62913 178 aaKnown RBP8.82□□□□□ -1
LSM5-210ENST00000480956 FSTL1Q12841 308 aa8.82□□□□□ -1
LSM5-210ENST00000480956 IFT88Q13099 833 aa8.82□□□□□ -1
LSM5-210ENST00000480956 MPP3Q13368 585 aa8.82□□□□□ -1
LSM5-210ENST00000480956 CATSPEREQ5SY80 951 aa8.82□□□□□ -1
LSM5-210ENST00000480956 PSAPL1Q6NUJ1 521 aa8.82□□□□□ -1
LSM5-210ENST00000480956 LYSMD2Q8IV50 215 aa8.82□□□□□ -1
LSM5-210ENST00000480956 TBC1D21Q8IYX1 336 aa8.82□□□□□ -1
LSM5-210ENST00000480956 C17orf53Q8N3J3 647 aaPredicted RBP8.82□□□□□ -1
LSM5-210ENST00000480956 OR1N1Q8NGS0 311 aa8.82□□□□□ -1
LSM5-210ENST00000480956 OR14C36Q8NHC7 312 aa8.82□□□□□ -1
LSM5-210ENST00000480956 SH3RF2Q8TEC5 729 aa8.82□□□□□ -1
LSM5-210ENST00000480956 ZNF606Q8WXB4 792 aa8.82□□□□□ -1
LSM5-210ENST00000480956 ZNF764Q96H86 408 aaPredicted RBP8.82□□□□□ -1
LSM5-210ENST00000480956 MRGPRX1Q96LB2 322 aa8.82□□□□□ -1
LSM5-210ENST00000480956 P2RX7Q99572 595 aaKnown RBP8.82□□□□□ -1
LSM5-210ENST00000480956 REEP2Q9BRK0 252 aa8.82□□□□□ -1
LSM5-210ENST00000480956 MYL10Q9BUA6 226 aa8.82□□□□□ -1
LSM5-210ENST00000480956 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms