RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ZACNQ401N2 412 aa21.27■■□□□ 1
LIME1-205ENST00000480139 TCEAL5Q5H9L2 206 aa21.27■■□□□ 1
LIME1-205ENST00000480139 C15orf39Q6ZRI6 1047 aa21.27■■□□□ 1
LIME1-205ENST00000480139 SRRTQ9BXP5 876 aaKnown RBP21.27■■□□□ 1
LIME1-205ENST00000480139 FNIP2Q9P278 1114 aa21.27■■□□□ 1
LIME1-205ENST00000480139 R3HCC1Q9Y3T6 440 aaKnown RBP21.27■■□□□ 1
LIME1-205ENST00000480139 PCDHGC5Q9Y5F6 944 aa21.27■■□□□ 1
LIME1-205ENST00000480139 MYO7AQ13402 2215 aa21.27■□□□□ 0.99
LIME1-205ENST00000480139 KPNA7A9QM74 516 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 I3L4J1 428 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 CSPG5O95196 566 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 TYMPP19971 482 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 TKTP29401 623 aaKnown RBP21.26■□□□□ 0.99
LIME1-205ENST00000480139 TYRO3Q06418 890 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 MYO1EQ12965 1108 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 COL19A1Q14993 1142 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 TDRD10Q5VZ19 366 aaKnown RBP21.26■□□□□ 0.99
LIME1-205ENST00000480139 ANKS3Q6ZW76 656 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 APPL2Q8NEU8 664 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 AUTS2Q8WXX7 1259 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 RIN2Q8WYP3 895 aaPredicted RBP21.26■□□□□ 0.99
LIME1-205ENST00000480139 B3GALT6Q96L58 329 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 EMILIN2Q9BXX0 1053 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 GDAP2Q9NXN4 497 aa21.26■□□□□ 0.99
LIME1-205ENST00000480139 NCK2O43639 380 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 CYP11A1P05108 521 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 TRIM49P0CI25 452 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 TRIM49CP0CI26 452 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 ODC1P11926 461 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 ATICP31939 592 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 PPP3CAQ08209 521 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 BIRC3Q13489 604 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 MRPL58Q14197 206 aaKnown RBP21.25■□□□□ 0.99
LIME1-205ENST00000480139 DUSP6Q16828 381 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 CCDC40Q4G0X9 1142 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 DSTYKQ6XUX3 929 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 SV2AQ7L0J3 742 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 ADGRD2Q7Z7M1 963 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 CEP57Q86XR8 500 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 MAFAQ8NHW3 353 aaPredicted RBP21.25■□□□□ 0.99
LIME1-205ENST00000480139 LNX1Q8TBB1 728 aaPredicted RBP21.25■□□□□ 0.99
LIME1-205ENST00000480139 SLC35C1Q96A29 364 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 HPDLQ96IR7 371 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 SENP8Q96LD8 212 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 THAP9Q9H5L6 903 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 VRTNQ9H8Y1 702 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 TMEM8AQ9HCN3 771 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 BACE2Q9Y5Z0 518 aa21.25■□□□□ 0.99
LIME1-205ENST00000480139 C2CD2LO14523 706 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 PHACTR2O75167 634 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 C1RP00736 705 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 CST3P01034 146 aaPredicted RBP21.24■□□□□ 0.99
LIME1-205ENST00000480139 CCDC192P0DO97 292 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 HYAL1Q12794 435 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 TRPC3Q13507 836 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 PSMD5Q16401 504 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 VARS2Q5ST30 1063 aaKnown RBP21.24■□□□□ 0.99
LIME1-205ENST00000480139 KRT39Q6A163 491 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 SCARA3Q6AZY7 606 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 MICALL1Q8N3F8 863 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 ENOX1Q8TC92 643 aaKnown RBP21.24■□□□□ 0.99
LIME1-205ENST00000480139 KLHL5Q96PQ7 755 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 OXCT2Q9BYC2 517 aaPredicted RBP21.24■□□□□ 0.99
LIME1-205ENST00000480139 TLE6Q9H808 572 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 MTRRQ9UBK8 725 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 DSEQ9UL01 958 aa21.24■□□□□ 0.99
LIME1-205ENST00000480139 H7C4K7 107 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 OAZ2O95190 189 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 VNN1O95497 513 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 CNPP09543 421 aaKnown RBP21.23■□□□□ 0.99
LIME1-205ENST00000480139 CA8P35219 290 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 GCLMP48507 274 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 NRIP1P48552 1158 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 NDUFV1P49821 464 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 NCOA4Q13772 614 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 TPD52L1Q16890 204 aaPredicted RBP21.23■□□□□ 0.99
LIME1-205ENST00000480139 DCAF17Q5H9S7 520 aaPredicted RBP21.23■□□□□ 0.99
LIME1-205ENST00000480139 TCERG1LQ5VWI1 586 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 C11orf57Q6ZUT1 292 aaPredicted RBP21.23■□□□□ 0.99
LIME1-205ENST00000480139 PPFIBP1Q86W92 1011 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 TRIM59Q8IWR1 403 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 EFHBQ8N7U6 833 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 SPATA18Q8TC71 538 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 TAF4BQ92750 862 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 FUCA2Q9BTY2 467 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 XYLT2Q9H1B5 865 aa21.23■□□□□ 0.99
LIME1-205ENST00000480139 CYB561D2O14569 222 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 PMM2O15305 246 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 TEX28O15482 410 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 TBC1D4O60343 1298 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 CLASP2O75122 1294 aaKnown RBP21.22■□□□□ 0.99
LIME1-205ENST00000480139 ADH1AP07327 375 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 MXI1P50539 228 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 YWHAHQ04917 246 aaPredicted RBP21.22■□□□□ 0.99
LIME1-205ENST00000480139 KCNC3Q14003 757 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 PRSS55Q6UWB4 352 aaPredicted RBP21.22■□□□□ 0.99
LIME1-205ENST00000480139 DPH6Q7L8W6 267 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 LIMS2Q7Z4I7 341 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 IRF2BP1Q8IU81 584 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 FAM114A1Q8IWE2 563 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms