RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 TRMT13Q9NUP7 481 aaKnown RBP6.81□□□□□ -1.32
SF3B1-209ENST00000479532 UBP1Q9NZI7 540 aa6.81□□□□□ -1.32
SF3B1-209ENST00000479532 WRAP73Q9P2S5 460 aaPredicted RBP6.81□□□□□ -1.32
SF3B1-209ENST00000479532 KCNG1Q9UIX4 513 aa6.81□□□□□ -1.32
SF3B1-209ENST00000479532 AKT3Q9Y243 479 aa6.81□□□□□ -1.32
SF3B1-209ENST00000479532 ZKSCAN5Q9Y2L8 839 aa6.81□□□□□ -1.32
SF3B1-209ENST00000479532 PCDHB5Q9Y5E4 795 aa6.81□□□□□ -1.32
SF3B1-209ENST00000479532 CENPFP49454 3210 aa6.81□□□□□ -1.32
SF3B1-209ENST00000479532 ALPK3Q96L96 1907 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 MBLAC1A4D2B0 266 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 E9PMD0 336 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 TULP2O00295 520 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 POLR2DO15514 142 aaKnown RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 ASAP2O43150 1006 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 GREM1O60565 184 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 MAFO75444 373 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 C22orf31O95567 290 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 CD4P01730 458 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 PLA2G4BP0C869 781 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 PFKFB1P16118 471 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 ARNTP27540 789 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 THPOP40225 353 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 NPEPPSP55786 919 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 ZNF445P59923 1031 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 UBE2HP62256 183 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 GRB10Q13322 594 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 TFDP1Q14186 410 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 DHX8Q14562 1220 aaKnown RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 MXD4Q14582 209 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 PPP2R5AQ15172 486 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 TARBP2Q15633 366 aaKnown RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 FAM102BQ5T8I3 360 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 RPAINQ86UA6 219 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 SERINC5Q86VE9 423 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 TRIM42Q8IWZ5 723 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 ABI1Q8IZP0 508 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 TMEM199Q8N511 208 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 PDILTQ8N807 584 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 SYT2Q8N9I0 419 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 PPP1R13LQ8WUF5 828 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 TRAPPC12Q8WVT3 735 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 DNAJB3Q8WWF6 145 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 EVPLQ92817 2033 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 KIFAP3Q92845 792 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 CCDC47Q96A33 483 aaKnown RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 DHX58Q96C10 678 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 IFT74Q96LB3 600 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 LBHD1Q9BQE6 289 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 INO80BQ9C086 356 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 FAM49AQ9H0Q0 323 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 TRPV6Q9H1D0 765 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 MIR1-1HGQ9H1L0 117 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 DHX33Q9H6R0 707 aaKnown RBP6.8□□□□□ -1.32
SF3B1-209ENST00000479532 CALCOCO1Q9P1Z2 691 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 KCNH3Q9ULD8 1083 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 EFR3BQ9Y2G0 817 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 TRPV2Q9Y5S1 764 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 MYH11P35749 1972 aa6.8□□□□□ -1.32
SF3B1-209ENST00000479532 PHLPP2Q6ZVD8 1323 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 TANC1Q9C0D5 1861 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 A0A1B0GVL5 298 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 TMEM150BA6NC51 233 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 RSPH10B2B2RC85 870 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 H0YCG3 227 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 LINC01387J3KSC0 135 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 KIAA0355O15063 1070 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 KINO60870 393 aaKnown RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 TBCAO75347 108 aaKnown RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 STBD1O95210 358 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 MYL1P05976 194 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 RSPH10BP0C881 870 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 CKBP12277 381 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 CYP11B2P19099 503 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 ABCD1P33897 745 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 RFC2P35250 354 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 RGS19P49795 217 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 CLCN3P51790 818 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 ADAM17P78536 824 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 MRPS6P82932 125 aaKnown RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 ZNF200P98182 395 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 GSTM4Q03013 218 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 SEPT6Q14141 434 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 LRRC14Q15048 493 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 MARCH8Q5T0T0 291 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 LLGL2Q6P1M3 1020 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 BNC2Q6ZN30 1099 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 USP49Q70CQ1 688 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 LRRC8DQ7L1W4 858 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 ZNF410Q86VK4 478 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 GPBP1Q86WP2 473 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 RHPN2Q8IUC4 686 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 RPUSD2Q8IZ73 545 aaKnown RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 LRRC71Q8N4P6 559 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 CNNM3Q8NE01 707 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 GRIN3AQ8TCU5 1115 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 CHAMP1Q96JM3 812 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 ZNF830Q96NB3 372 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 SH2D3AQ9BRG2 576 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 EMILIN2Q9BXX0 1053 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms