RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 MRPS23Q9Y3D9 190 aaKnown RBP11.72□□□□□ -0.53
SEC13-214ENST00000476597 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
SEC13-214ENST00000476597 ANO9A1A5B4 782 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 H0Y858 1186 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 SPTLC1O15269 473 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 PPP6R2O75170 966 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 NFICP08651 508 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 PDIA4P13667 645 aaKnown RBP11.71□□□□□ -0.53
SEC13-214ENST00000476597 STAT6P42226 847 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 GPC5P78333 572 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 ADCY1Q08828 1119 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 TMEM132DQ14C87 1099 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 STK38Q15208 465 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 SLC5A9Q2M3M2 681 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 L1TD1Q5T7N2 865 aaKnown RBP11.71□□□□□ -0.53
SEC13-214ENST00000476597 C9orf57Q5W0N0 161 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 RNF19BQ6ZMZ0 732 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 MTSS1LQ765P7 747 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 USP37Q86T82 979 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 PDILTQ8N807 584 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 POMGNT1Q8WZA1 660 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 SENP8Q96LD8 212 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 ACCSQ96QU6 501 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 RTP3Q9BQQ7 232 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 GDE1Q9NZC3 331 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 TBC1D7Q9P0N9 293 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 EXOC7Q9UPT5 735 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 C2CD2Q9Y426 696 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 INSL5Q9Y5Q6 135 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 DENND4AQ7Z401 1863 aa11.71□□□□□ -0.53
SEC13-214ENST00000476597 OR6C75A6NL08 312 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 MICAL2O94851 1124 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 VNN2O95498 520 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 IDEP14735 1019 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 GPR17Q13304 367 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 E2F4Q16254 413 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 PRSS36Q5K4E3 855 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 ATOH1Q92858 354 aaPredicted RBP11.7□□□□□ -0.54
SEC13-214ENST00000476597 MCRS1Q96EZ8 462 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 ZNF512Q96ME7 567 aaPredicted RBP11.7□□□□□ -0.54
SEC13-214ENST00000476597 CORO1BQ9BR76 489 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 PANK4Q9NVE7 773 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 CEP72Q9P209 647 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 CA14Q9ULX7 337 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 C2orf16Q68DN1 1984 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 VWA8A3KMH1 1905 aa11.7□□□□□ -0.54
SEC13-214ENST00000476597 MTCL1Q9Y4B5 1905 aaKnown RBP11.69□□□□□ -0.54
SEC13-214ENST00000476597 ZNF197O14709 1029 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 CUTAO60888 179 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 ECI2O75521 394 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 GCNT3O95395 438 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 YEATS4O95619 227 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 LDHAP00338 332 aaKnown RBP11.69□□□□□ -0.54
SEC13-214ENST00000476597 CYP11A1P05108 521 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 OR4Q2P0C623 313 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 ZSCAN22P10073 491 aaPredicted RBP11.69□□□□□ -0.54
SEC13-214ENST00000476597 CPB1P15086 417 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 GARTP22102 1010 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 CASP5P51878 434 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 TWF1Q12792 350 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 ALCAMQ13740 583 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 MYBPC2Q14324 1141 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 CYP4A22Q5TCH4 519 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 OVOS1Q6IE37 1185 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 IQCEQ6IPM2 695 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 NT5DC4Q86YG4 428 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 HSCBQ8IWL3 235 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 ZSWIM2Q8NEG5 633 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 ING5Q8WYH8 240 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 TCEAL4Q96EI5 215 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 BORCS6Q96GS4 357 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 FGFBP2Q9BYJ0 223 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 LRRC27Q9C0I9 530 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 TNMDQ9H2S6 317 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 CUEDC2Q9H467 287 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 KBTBD4Q9NVX7 518 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 DPP3Q9NY33 737 aa11.69□□□□□ -0.54
SEC13-214ENST00000476597 VPS13AQ96RL7 3174 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 STK25O00506 426 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 MOSPD3O75425 235 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 PRPF6O94906 941 aaKnown RBP11.68□□□□□ -0.54
SEC13-214ENST00000476597 IL18RAPO95256 599 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 ODC1P11926 461 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 CEBPBP17676 345 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 CCR2P41597 374 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 EPHA5P54756 1037 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 STARD6P59095 220 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 DUSP4Q13115 394 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 TANGO2Q6ICL3 276 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 CENPPQ6IPU0 288 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 ARMCX5Q6P1M9 558 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 PDZD4Q76G19 769 aaPredicted RBP11.68□□□□□ -0.54
SEC13-214ENST00000476597 CCDC65Q8IXS2 484 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 EFCAB13Q8IY85 973 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
SEC13-214ENST00000476597 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms