RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	GTF2H1	P32780	548 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	PNPLA4	P41247	253 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	BRCC3	P46736	316 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	TAF6	P49848	677 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	MARS	P56192	900 aa	Known RBP	10.8	□□□□□ -0.68
DMD-223	ENST00000475732	LILRA4	P59901	499 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	ERVFC1	P60507	584 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	BIRC3	Q13489	604 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	CAMK1	Q14012	370 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	USP41	Q3LFD5	358 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	SV2C	Q496J9	727 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	ANO6	Q4KMQ2	910 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.8	□□□□□ -0.68
DMD-223	ENST00000475732	TCERG1L	Q5VWI1	586 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	KIAA1841	Q6NSI8	718 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	CD300LG	Q6UXG3	332 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	FAM114A1	Q8IWE2	563 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	RNF168	Q8IYW5	571 aa	Predicted RBP	10.8	□□□□□ -0.68
DMD-223	ENST00000475732	LRRC52	Q8N7C0	313 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	CXorf38	Q8TB03	319 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	ENOX1	Q8TC92	643 aa	Known RBP	10.8	□□□□□ -0.68
DMD-223	ENST00000475732	MICAL1	Q8TDZ2	1067 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	MRPL38	Q96DV4	380 aa	Known RBP	10.8	□□□□□ -0.68
DMD-223	ENST00000475732	FAM84A	Q96KN4	292 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	ZNF560	Q96MR9	790 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	GUCD1	Q96NT3	240 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	TCF25	Q9BQ70	676 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	HERC2P3	Q9BVR0	1158 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	VN1R3	Q9BXE9	311 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	THAP9	Q9H5L6	903 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	NGRN	Q9NPE2	291 aa	Known RBP	10.8	□□□□□ -0.68
DMD-223	ENST00000475732	ENTPD7	Q9NQZ7	604 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	MYO7A	Q13402	2215 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	CSPG5	O95196	566 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	CST3	P01034	146 aa	Predicted RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	C4BPA	P04003	597 aa	Known RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	UROD	P06132	367 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	CTSA	P10619	480 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	IGFBP6	P24592	240 aa	Predicted RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	CA8	P35219	290 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	GCLM	P48507	274 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	GLUD2	P49448	558 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	PPP3CA	Q08209	521 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	MYO1E	Q12965	1108 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	TRPC3	Q13507	836 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	ADGRE1	Q14246	886 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	SMC1A	Q14683	1233 aa	Known RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	ZACN	Q401N2	412 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	TIGD5	Q53EQ6	642 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	C1orf220	Q5T0J3	134 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	FAM171A1	Q5VUB5	890 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	TDRD10	Q5VZ19	366 aa	Known RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	KRT39	Q6A163	491 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	DSTYK	Q6XUX3	929 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	SV2A	Q7L0J3	742 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	TAS1R1	Q7RTX1	841 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	CEP57	Q86XR8	500 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	CREBRF	Q8IUR6	639 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	MYLIP	Q8WY64	445 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	RNF166	Q96A37	237 aa	Predicted RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	SUSD3	Q96L08	255 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	CNOT6L	Q96LI5	555 aa	Known RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	BPIFA3	Q9BQP9	254 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	TTPAL	Q9BTX7	342 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	FUCA2	Q9BTY2	467 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	ZBP1	Q9H171	429 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	MMRN2	Q9H8L6	949 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	TMEM8A	Q9HCN3	771 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	MRPL17	Q9NRX2	175 aa	Known RBP	10.79	□□□□□ -0.68
DMD-223	ENST00000475732	CHST7	Q9NS84	486 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	SIX4	Q9UIU6	781 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	SSX2IP	Q9Y2D8	614 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	NFE2L3	Q9Y4A8	694 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	MTCH2	Q9Y6C9	303 aa		10.79	□□□□□ -0.68
DMD-223	ENST00000475732	ARHGEF37	A1IGU5	675 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	KPNA7	A9QM74	516 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732		I3L4J1	428 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732		M0QZQ0	153 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	FSCN2	O14926	492 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	SYN3	O14994	580 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	SPTLC1	O15269	473 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	CXCL14	O95715	111 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	ODC1	P11926	461 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	FOSL2	P15408	326 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	FGFR3	P22607	806 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	ATIC	P31939	592 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	IRS1	P35568	1242 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	AARS	P49588	968 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
DMD-223	ENST00000475732	MXI1	P50539	228 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	MYL5	Q02045	173 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	DSG1	Q02413	1049 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	NCOA4	Q13772	614 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	PLPP4	Q5VZY2	271 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	PDXDC1	Q6P996	788 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	C15orf39	Q6ZRI6	1047 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	TRIM59	Q8IWR1	403 aa		10.78	□□□□□ -0.68
DMD-223	ENST00000475732	GPR65	Q8IYL9	337 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms