RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 KREMEN1Q96MU8 473 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 UIMC1Q96RL1 719 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 FRMD8Q9BZ67 464 aaPredicted RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 FAM192AQ9GZU8 254 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 PCDH9Q9HC56 1237 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 CHST7Q9NS84 486 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 UTRNP46939 3433 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 IQANK1A0A1B0GTG1 560 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 RIMBP2O15034 1052 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 ALOX15BO15296 676 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 NVLO15381 856 aaKnown RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 TPBGLP0DKB5 382 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 UNGP13051 313 aaPredicted RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 RARRES1P49788 294 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 AP3M2P53677 418 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 RTP1P59025 263 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 KLF1Q13351 362 aaPredicted RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 KPNB1Q14974 876 aaKnown RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 KRT72Q14CN4 511 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 FAM98CQ17RN3 349 aaKnown RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 P3H1Q32P28 736 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 ZFYVE27Q5T4F4 411 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 LGSNQ5TDP6 509 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 DAB2IPQ5VWQ8 1189 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 PHF13Q86YI8 300 aaPredicted RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 ZDHHC14Q8IZN3 488 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 OGFOD1Q8N543 542 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 MCPH1Q8NEM0 835 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 DENND1AQ8TEH3 1009 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 ZFAND2BQ8WV99 257 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 DTNBP1Q96EV8 351 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 FBXL18Q96ME1 805 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 FNBP1Q96RU3 617 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 SENP7Q9BQF6 1050 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 VCX3BQ9H321 246 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 LRRC4CQ9HCJ2 640 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 PDP2Q9P2J9 529 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 TBK1Q9UHD2 729 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 PNMA3Q9UL41 463 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 TBX20Q9UMR3 447 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 ZNF148Q9UQR1 794 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 TCRBV7S2A1N4TA0A589 114 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 DNAJC6O75061 913 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 CIB2O75838 187 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 LDHAP00338 332 aaKnown RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 RALAP11233 206 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 IRX4P78413 519 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 OCRLQ01968 901 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 ZBTB16Q05516 673 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 CDK18Q07002 472 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 C11orf91Q3C1V1 193 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 BRDTQ58F21 947 aaPredicted RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 FAM91A1Q658Y4 838 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 CC2D2BQ6DHV5 1058 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 FAM196AQ6ZSG2 479 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 FAM47EQ6ZV65 393 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 NLRP9Q7RTR0 991 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 VPS52Q8N1B4 723 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 FAM13CQ8NE31 585 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 CBWD1Q9BRT8 395 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 TBC1D10AQ9BXI6 508 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 IMPG2Q9BZV3 1241 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 SYNCQ9H7C4 482 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 KMT5AQ9NQR1 393 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 IL1RAPL1Q9NZN1 696 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 ZNF212Q9UDV6 495 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 TMX2Q9Y320 296 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 WDR64B1ANS9 1081 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 ATMINO43313 823 aaPredicted RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 PEX11AO75192 247 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 SMIM24O75264 130 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 LSM8O95777 96 aaKnown RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 CYP1A1P04798 512 aaPredicted RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 ITGAVP06756 1048 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 KLRC2P26717 231 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 YWHABP31946 246 aaKnown RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 SSR1P43307 286 aaKnown RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 SCNN1DP51172 638 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 DLG4P78352 724 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 CYP24A1Q07973 514 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 NFX1Q12986 1120 aaKnown RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 DNAJC3Q13217 504 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 PIGHQ14442 188 aaPredicted RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 EFHC2Q5JST6 749 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 SLC27A3Q5K4L6 730 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 SLFN12LQ6IEE8 588 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 CYP4F22Q6NT55 531 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 NSMFQ6X4W1 530 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 PHLDB2Q86SQ0 1253 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 DAW1Q8N136 415 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 CERS5Q8N5B7 392 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 C10orf82Q8WW14 230 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 DDX1Q92499 740 aaKnown RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 PRCCQ92733 491 aaPredicted RBP6.46□□□□□ -1.37
HERC4-209ENST00000473533 NSL1Q96IY1 281 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 BTBD10Q9BSF8 475 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 ZNF518BQ9C0D4 1074 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 MTFR1LQ9H019 292 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 FAM96AQ9H5X1 160 aa6.46□□□□□ -1.37
HERC4-209ENST00000473533 DNAJB4Q9UDY4 337 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms