RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 DCAF17Q5H9S7 520 aaPredicted RBP20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 FAM171A1Q5VUB5 890 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 KIAA0319Q5VV43 1072 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 TCERG1LQ5VWI1 586 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 KRT39Q6A163 491 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 SV2AQ7L0J3 742 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 TAS1R1Q7RTX1 841 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 TRIM59Q8IWR1 403 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 CNOT6LQ96LI5 555 aaKnown RBP20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 TTPALQ9BTX7 342 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 NSUN3Q9H649 340 aaKnown RBP20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 MRPL17Q9NRX2 175 aaKnown RBP20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 PCDHB8Q9UN66 801 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 KPNA7A9QM74 516 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 SPTLC1O15269 473 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 FOSL2P15408 326 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 IGFBP4P22692 258 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 MYL5Q02045 173 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 TRPC3Q13507 836 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 PTPN14Q15678 1187 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 PLPP4Q5VZY2 271 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 KIAA1841Q6NSI8 718 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 DSTYKQ6XUX3 929 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 IRF2BP1Q8IU81 584 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 MRPL43Q8N983 215 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 APPL2Q8NEU8 664 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 MICAL1Q8TDZ2 1067 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 PIK3R5Q8WYR1 880 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 PPP2R3CQ969Q6 453 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 GDAP2Q9NXN4 497 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 NFE2L3Q9Y4A8 694 aa20.44■□□□□ 0.86
CTDSP1-207ENST00000473420 I3L4J1 428 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 LILRB3O75022 631 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 VNN1O95497 513 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 CXCL14O95715 111 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 CST3P01034 146 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 ODC1P11926 461 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 TYMPP19971 482 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 TKTP29401 623 aaKnown RBP20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 GCLMP48507 274 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 MXI1P50539 228 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 NCOA4Q13772 614 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 RTP2Q5QGT7 225 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 HPDLQ96IR7 371 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 SENP8Q96LD8 212 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 VRTNQ9H8Y1 702 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 DSEQ9UL01 958 aa20.43■□□□□ 0.86
CTDSP1-207ENST00000473420 PRRC2BQ5JSZ5 2229 aaKnown RBP20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 FSD2A1L4K1 749 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 C2orf71A6NGG8 1288 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 PMM2O15305 246 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 N4BP1O75113 896 aaKnown RBP20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 CAVIN2O95810 425 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 CYP11A1P05108 521 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 SCARA3Q6AZY7 606 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 ANKS3Q6ZW76 656 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 CEP57Q86XR8 500 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 RIN2Q8WYP3 895 aaPredicted RBP20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 TAF4BQ92750 862 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 RXFP1Q9HBX9 757 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 FNIP2Q9P278 1114 aa20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 MAGEC2Q9UBF1 373 aaPredicted RBP20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.42■□□□□ 0.86
CTDSP1-207ENST00000473420 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 HIDE1A8MVS5 230 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 P4HA2O15460 535 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 HLA-DRAP01903 254 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 EEF1GP26641 437 aaKnown RBP20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 PIK3CAP42336 1068 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 MYL6P60660 151 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 MRPL58Q14197 206 aaKnown RBP20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 SGSM1Q2NKQ1 1148 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 CDKAL1Q5VV42 579 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 FBXL13Q8NEE6 735 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 LNX1Q8TBB1 728 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 SPATA18Q8TC71 538 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 AUTS2Q8WXX7 1259 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 B3GALT6Q96L58 329 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 CDCA3Q99618 268 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 EMILIN2Q9BXX0 1053 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 XYLT2Q9H1B5 865 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 MMRN2Q9H8L6 949 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 COQ4Q9Y3A0 265 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 PCDHGC5Q9Y5F6 944 aa20.41■□□□□ 0.86
CTDSP1-207ENST00000473420 H7C4K7 107 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 CYB561D2O14569 222 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 CSPG5O95196 566 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 CA8P35219 290 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 FMO5P49326 533 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 ZNF165P49910 485 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 PSMD5Q16401 504 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 CBWD6Q4V339 395 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 CBWD3Q5JTY5 395 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 CBWD5Q5RIA9 395 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 VARS2Q5ST30 1063 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 DPH6Q7L8W6 267 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 ADGRD2Q7Z7M1 963 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 TOP6BLQ8N6T0 577 aa20.4■□□□□ 0.86
CTDSP1-207ENST00000473420 OXCT2Q9BYC2 517 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms