RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 DNAJC19Q96DA6 116 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 NACC1Q96RE7 527 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 BPIFA3Q9BQP9 254 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 REEP2Q9BRK0 252 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 ZBP1Q9H171 429 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 ZHX3Q9H4I2 956 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 TBC1D17Q9HA65 648 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 PANK4Q9NVE7 773 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 SCHIP1Q9P0W5 487 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-205ENST00000472928 GABBR1Q9UBS5 961 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 WNT16Q9UBV4 365 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 PCDHA10Q9Y5I2 948 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 C2orf16Q68DN1 1984 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 PVALEFA0A1B0GWK0 134 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 TMEM150BA6NC51 233 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 SMTNL1A8MU46 457 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 NT5C1B-RDH14C9J2C7 533 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 PSMA7O14818 248 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 IKBKBO14920 756 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ZBTB39O15060 712 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 GPR182O15218 404 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ZNF862O60290 1169 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 USO1O60763 962 aaKnown RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 DKC1O60832 514 aaKnown RBP eCLIP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 GPR32O75388 356 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 FAM13AO94988 1023 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 LYPLA2O95372 231 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 CXCL14O95715 111 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 DCNP07585 359 aaKnown RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 GLULP15104 373 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 YWHABP31946 246 aaKnown RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 SMTNP53814 917 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ATXN1P54253 815 aaKnown RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 MARSP56192 900 aaKnown RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 STX17P56962 302 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 TBC1D8BQ0IIM8 1120 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 FOXC1Q12948 553 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 PAK1Q13153 545 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 KIZQ2M2Z5 673 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ARSHQ5FYA8 562 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 FAM160B1Q5W0V3 765 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ABHD15Q6UXT9 468 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 TRMT1LQ7Z2T5 733 aaKnown RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 SFR1Q86XK3 245 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ECHDC2Q86YB7 292 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 SLC9A9Q8IVB4 645 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 GLYCTKQ8IVS8 523 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 C4orf19Q8IY42 314 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 MAML2Q8IZL2 1156 aaPredicted RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 VPS52Q8N1B4 723 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 KIAA0895Q8NCT3 520 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 BCL7CQ8WUZ0 217 aaPredicted RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 NELFBQ8WX92 580 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 RSAD2Q8WXG1 361 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ACSF2Q96CM8 615 aaPredicted RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 PPP1R16BQ96T49 567 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 OSMRQ99650 979 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 VN1R3Q9BXE9 311 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 KLF16Q9BXK1 252 aaPredicted RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 GTPBP4Q9BZE4 634 aaKnown RBP6.97□□□□□ -1.29
HDAC1-205ENST00000472928 AZI2Q9H6S1 392 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 ZNF302Q9NR11 478 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 IGSF9Q9P2J2 1179 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 MAPK8IP1Q9UQF2 711 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 HRH3Q9Y5N1 445 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 IRAK3Q9Y616 596 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 WASF2Q9Y6W5 498 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 SDK1Q7Z5N4 2213 aa6.97□□□□□ -1.29
HDAC1-205ENST00000472928 CITO14578 2027 aa6.96□□□□□ -1.29
HDAC1-205ENST00000472928 SETXQ7Z333 2677 aaKnown RBP6.96□□□□□ -1.29
HDAC1-205ENST00000472928 ANK1P16157 1881 aa6.96□□□□□ -1.29
HDAC1-205ENST00000472928 IGKV6D-21A0A0A0MT36 114 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 A0A1W2PRU2 124 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 FRMD3A2A2Y4 597 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 HIP1RO75146 1068 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 C22orf31O95567 290 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 CTSAP10619 480 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 GAP43P17677 238 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 GUCY2CP25092 1073 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 ERCC5P28715 1186 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-205ENST00000472928 PRCPP42785 496 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 RARRES1P49788 294 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 STAT5BP51692 787 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 CRYBB1P53674 252 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-205ENST00000472928 TERF1P54274 439 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 NPEPPSP55786 919 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 BCAR1P56945 870 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 EHHADHQ08426 723 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 CBLBQ13191 982 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 CLN3Q13286 438 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 GIT2Q14161 759 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 NAA30Q147X3 362 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-205ENST00000472928 TPD52L1Q16890 204 aaPredicted RBP6.96□□□□□ -1.3
HDAC1-205ENST00000472928 XKR9Q5GH70 373 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 TBCELQ5QJ74 424 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 ODR4Q5SWX8 454 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 RINT1Q6NUQ1 792 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 SWSAP1Q6NVH7 229 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 ZC3H14Q6PJT7 736 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms