RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 NUB1Q9Y5A7 615 aa23.94■■□□□ 1.42
PAXBP1-208ENST00000472588 FNDC1Q4ZHG4 1894 aaPredicted RBP23.94■■□□□ 1.42
PAXBP1-208ENST00000472588 ZBBXA8MT70 800 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 STAT1P42224 750 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 UPP1Q16831 310 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 ARHGAP44Q17R89 818 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 TMEM240Q5SV17 173 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 SPOPLQ6IQ16 392 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 GJB7Q6PEY0 223 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 LRRC43Q8N309 656 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 TTC39CQ8N584 583 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 BAP1Q92560 729 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 DNAJC7Q99615 494 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 APOBEC3GQ9HC16 384 aaKnown RBP23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 NXF1Q9UBU9 619 aaKnown RBP23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 LRRC53A6NM62 1247 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 TBKBP1A7MCY6 615 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 PODXLO00592 558 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 CLCNKBP51801 687 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 JAM2P57087 298 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 DSC1Q08554 894 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 DRAP1Q14919 205 aaPredicted RBP23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 SFMBT2Q5VUG0 894 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 PDXDC1Q6P996 788 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 CYP3A43Q9HB55 503 aa23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 COLQQ9Y215 455 aaPredicted RBP23.93■■□□□ 1.42
PAXBP1-208ENST00000472588 CARNS1A5YM72 827 aa23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 CASTOR2A6NHX0 329 aa23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 KPNA7A9QM74 516 aa23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 RNF225M0QZC1 329 aaPredicted RBP23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 DEKP35659 375 aaKnown RBP23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 DCLRE1AQ6PJP8 1040 aa23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 CCDC112Q8NEF3 446 aa23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 HERVK_113Q902F9 699 aa23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.92■■□□□ 1.423e-10■■□□□ 12.7
PAXBP1-208ENST00000472588 PRO3102Q9H379 93 aa23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 GDAP2Q9NXN4 497 aa23.92■■□□□ 1.42
PAXBP1-208ENST00000472588 SCN1AP35498 2009 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 F8VZ95 297 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 HNRNPH3P31942 346 aaKnown RBP23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 LILRA4P59901 499 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 DEFB103AP81534 67 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 LRRC8AQ8IWT6 810 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 COLGALT2Q8IYK4 626 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 PHOSPHO2Q8TCD6 241 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 SHC3Q92529 594 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 KREMEN1Q96MU8 473 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 SLC9A7Q96T83 725 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 TMEM175Q9BSA9 504 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 AIPL1Q9NZN9 384 aa23.91■■□□□ 1.42
PAXBP1-208ENST00000472588 ARHGEF37A1IGU5 675 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 DDHD2O94830 711 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 ALDH2P05091 517 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 FERP16591 822 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 BMP8BP34820 402 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 SOX5P35711 763 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 ASPAP45381 313 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 SCARA3Q6AZY7 606 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 DPH6Q7L8W6 267 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 ZNF689Q96CS4 500 aaPredicted RBP23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 TRIM44Q96DX7 344 aaPredicted RBP23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 MMS19Q96T76 1030 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 BCO2Q9BYV7 579 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 UBE2OQ9C0C9 1292 aaKnown RBP23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 SNX9Q9Y5X1 595 aa23.9■■□□□ 1.42
PAXBP1-208ENST00000472588 TMEM189-UBE2V1I3L0A0 370 aa23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 PPEF2O14830 753 aa23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 B3GAT3O94766 335 aa23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 FAM163BP0C2L3 166 aa23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 EPHB4P54760 987 aa23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 ZNF280BQ86YH2 543 aa23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 CMTR2Q8IYT2 770 aaKnown RBP23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 DNAI2Q9GZS0 605 aa23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 AJAP1Q9UKB5 411 aaPredicted RBP23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 BZW2Q9Y6E2 419 aaKnown RBP23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 SLC4A7Q9Y6M7 1214 aa23.89■■□□□ 1.41
PAXBP1-208ENST00000472588 FOXN3O00409 490 aaPredicted RBP23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 HUS1O60921 280 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 OR1G1P47890 313 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 GATMP50440 423 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 ASIC2Q16515 512 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 TMEM130Q8N3G9 435 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 KAT5Q92993 513 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 ELMO3Q96BJ8 720 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 COLEC11Q9BWP8 271 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 NRDE2Q9H7Z3 1164 aa23.88■■□□□ 1.41
PAXBP1-208ENST00000472588 TRAPPC3O43617 180 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 USP8P40818 1118 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 BPIFB4P59827 614 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 CDK17Q00537 523 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 GOLGA8FQ08AF8 430 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 GOLGA8DPQ0D2H9 430 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 HS1BP3Q53T59 392 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 FAM71AQ8IYT1 594 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 TOP6BLQ8N6T0 577 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 APPL2Q8NEU8 664 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 YME1L1Q96TA2 773 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 ARID3AQ99856 593 aa23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 BAG1Q99933 345 aaPredicted RBP23.87■■□□□ 1.41
PAXBP1-208ENST00000472588 GPR88Q9GZN0 384 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms