RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	ELAC2	Q9BQ52	826 aa	Known RBP	4.76	□□□□□ -1.65
PTCD3-209	ENST00000472044	GPR87	Q9BY21	358 aa		4.76	□□□□□ -1.65
PTCD3-209	ENST00000472044	SIK2	Q9H0K1	926 aa		4.76	□□□□□ -1.65
PTCD3-209	ENST00000472044	SLC45A2	Q9UMX9	530 aa		4.76	□□□□□ -1.65
PTCD3-209	ENST00000472044	PAXBP1	Q9Y5B6	917 aa		4.76	□□□□□ -1.65
PTCD3-209	ENST00000472044	RHPN2P1	A8MT19	583 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	GRXCR1	A8MXD5	290 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	LEFTY2	O00292	366 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	DNAJB5	O75953	348 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	PRSS23	O95084	383 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	ABHD16A	O95870	558 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	GNAI2	P04899	355 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	ITGB1	P05556	798 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	IFIT2	P09913	472 aa	Known RBP	4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	PIK3CB	P42338	1070 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	SELENOP	P49908	381 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	SCNN1G	P51170	649 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	CASP5	P51878	434 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	SUMO3	P55854	103 aa	Predicted RBP	4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	POU6F2	P78424	691 aa	Predicted RBP	4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	NHLH2	Q02577	135 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	SLFN5	Q08AF3	891 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	IFIT5	Q13325	482 aa	Known RBP	4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	FZD5	Q13467	585 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	BIRC2	Q13490	618 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	BRD3	Q15059	726 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	LCE1D	Q5T752	114 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	ERICH6B	Q5W0A0	696 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	DPP9	Q86TI2	863 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	TMIE	Q8NEW7	156 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	OR6B3	Q8NGW1	331 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	TBC1D15	Q8TC07	691 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	KLHL32	Q96NJ5	620 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	RPS6KC1	Q96S38	1066 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	P2RX7	Q99572	595 aa	Known RBP	4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	BDH2	Q9BUT1	245 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	APOL5	Q9BWW9	433 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	KRTAP4-7	Q9BYR0	210 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	UNK	Q9C0B0	810 aa	Known RBP	4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	REXO4	Q9GZR2	422 aa	Known RBP	4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	SMURF2	Q9HAU4	748 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	SLAMF7	Q9NQ25	335 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	TCAF1	Q9Y4C2	921 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044	TESMIN	Q9Y4I5	508 aa		4.75	□□□□□ -1.65
PTCD3-209	ENST00000472044		E9PLN8	166 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	BTN3A1	O00481	513 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	TRIM24	O15164	1050 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	PEX14	O75381	377 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	BRAF	P15056	766 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	PHKA1	P46020	1223 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	KCNJ5	P48544	419 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	MXRA7	P84157	204 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	PLP2	Q04941	152 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	MORC3	Q14149	939 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	RRP1B	Q14684	758 aa	Known RBP	4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	R3HDM1	Q15032	1099 aa	Known RBP	4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	NOMO2	Q5JPE7	1267 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	ZNF783	Q6ZMS7	281 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	TOGARAM2	Q6ZUX3	1019 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	PPP1R32	Q7Z5V6	425 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	USP37	Q86T82	979 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	SESTD1	Q86VW0	696 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	MAML1	Q92585	1016 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	PMM1	Q92871	262 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	PGBD4	Q96DM1	585 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	TNIP3	Q96KP6	325 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	ADO	Q96SZ5	270 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	PNKP	Q96T60	521 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	NEU1	Q99519	415 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	MYD88	Q99836	296 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	VKORC1	Q9BQB6	163 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	DEF6	Q9H4E7	631 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	ZNF287	Q9HBT7	754 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	STK32B	Q9NY57	414 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	CPNE7	Q9UBL6	633 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	OGDHL	Q9ULD0	1010 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	CHST2	Q9Y4C5	530 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	PLEKHM1	Q9Y4G2	1056 aa		4.74	□□□□□ -1.65
PTCD3-209	ENST00000472044	TRIM43B	A6NCK2	446 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	ZNF785	A8K8V0	405 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044		K7ESM1	405 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	TBC1D4	O60343	1298 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	FDXR	P22570	491 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	ACRV1	P26436	265 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	APOBEC3A	P31941	199 aa	Predicted RBP	4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	PRIM2	P49643	509 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	ZNF135	P52742	658 aa	Predicted RBP	4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	PSMC1	P62191	440 aa	Known RBP	4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	CNGB1	Q14028	1251 aa	Predicted RBP	4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	PRKD1	Q15139	912 aa	Predicted RBP	4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	CRB2	Q5IJ48	1285 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	TMPRSS6	Q8IU80	811 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	PDPR	Q8NCN5	879 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	SLC17A8	Q8NDX2	589 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	LOXL4	Q96JB6	756 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	MED15	Q96RN5	788 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	TBCB	Q99426	244 aa		4.73	□□□□□ -1.65
PTCD3-209	ENST00000472044	MPHOSPH6	Q99547	160 aa	Known RBP	4.73	□□□□□ -1.65

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