RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PTPRJQ12913 1337 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 TRIM49BA6NDI0 452 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 STX10O60499 249 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 CLASP2O75122 1294 aaKnown RBP16.29■□□□□ 0.2
SNX13-205ENST00000471744 KRT19P08727 400 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 CNPP09543 421 aaKnown RBP16.29■□□□□ 0.2
SNX13-205ENST00000471744 ODC1P11926 461 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 TYMPP19971 482 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 KLRC2P26717 231 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
SNX13-205ENST00000471744 NDUFV1P49821 464 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
SNX13-205ENST00000471744 NLRP12P59046 1061 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 MCCD1P59942 119 aaPredicted RBP16.29■□□□□ 0.2
SNX13-205ENST00000471744 BFSP1Q12934 665 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 ADAM15Q13444 863 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 CTC1Q2NKJ3 1217 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 LMBRD2Q68DH5 695 aaPredicted RBP16.29■□□□□ 0.2
SNX13-205ENST00000471744 TTI2Q6NXR4 508 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 ELMSAN1Q6PJG2 1045 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 LNX1Q8TBB1 728 aaPredicted RBP16.29■□□□□ 0.2
SNX13-205ENST00000471744 CASP10Q92851 521 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 IGFLR1Q9H665 355 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 METTL14Q9HCE5 456 aaKnown RBP16.29■□□□□ 0.2
SNX13-205ENST00000471744 DPP7Q9UHL4 492 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 RWDD2AQ9UIY3 292 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 BACE2Q9Y5Z0 518 aa16.29■□□□□ 0.2
SNX13-205ENST00000471744 LRRIQ3A6PVS8 624 aaPredicted RBP16.28■□□□□ 0.2
SNX13-205ENST00000471744 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 I3L4J1 428 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 PPEF2O14830 753 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 PER2O15055 1255 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 TEX28O15482 410 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 PHACTR2O75167 634 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 GNA14O95837 355 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 IGFBP6P24592 240 aaPredicted RBP16.28■□□□□ 0.2
SNX13-205ENST00000471744 GTF2H1P32780 548 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 TRPC3Q13507 836 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 AAK1Q2M2I8 961 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 VARS2Q5ST30 1063 aaKnown RBP16.28■□□□□ 0.2
SNX13-205ENST00000471744 ZNF280DQ6N043 979 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 TMEM184AQ6ZMB5 413 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 FILIP1Q7Z7B0 1213 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 CXorf38Q8TB03 319 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 PLEKHO2Q8TD55 490 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 B3GALT6Q96L58 329 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 SENP8Q96LD8 212 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 POP1Q99575 1024 aaKnown RBP16.28■□□□□ 0.2
SNX13-205ENST00000471744 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
SNX13-205ENST00000471744 UBE2ZQ9H832 354 aaPredicted RBP16.28■□□□□ 0.2
SNX13-205ENST00000471744 CLDND1Q9NY35 253 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 THEGQ9P2T0 379 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 MTRRQ9UBK8 725 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 SIX4Q9UIU6 781 aa16.28■□□□□ 0.2
SNX13-205ENST00000471744 TSC2P49815 1807 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
SNX13-205ENST00000471744 CYP11A1P05108 521 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 ERCC5P28715 1186 aaPredicted RBP16.27■□□□□ 0.2
SNX13-205ENST00000471744 ATICP31939 592 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 YWHAHQ04917 246 aaPredicted RBP16.27■□□□□ 0.2
SNX13-205ENST00000471744 BIRC3Q13489 604 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 KCNC3Q14003 757 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.2
SNX13-205ENST00000471744 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 SASS6Q6UVJ0 657 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 PRSS55Q6UWB4 352 aaPredicted RBP16.27■□□□□ 0.2
SNX13-205ENST00000471744 FRMD5Q7Z6J6 570 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 METTL23Q86XA0 190 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 SPATA18Q8TC71 538 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 BORCS6Q96GS4 357 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 HPDLQ96IR7 371 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 DUSP9Q99956 384 aaKnown RBP16.27■□□□□ 0.2
SNX13-205ENST00000471744 DZANK1Q9NVP4 752 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 GDAP2Q9NXN4 497 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 ARMCX3Q9UH62 379 aaPredicted RBP16.27■□□□□ 0.2
SNX13-205ENST00000471744 HCFC2Q9Y5Z7 792 aa16.27■□□□□ 0.2
SNX13-205ENST00000471744 PLXNA3P51805 1871 aa16.27■□□□□ 0.19
SNX13-205ENST00000471744 CYB561D2O14569 222 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 SPTLC1O15269 473 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 HUS1O60921 280 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 OAZ2O95190 189 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 STAU1O95793 577 aaKnown RBP16.26■□□□□ 0.19
SNX13-205ENST00000471744 GLUD1P00367 558 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 C4BPAP04003 597 aaKnown RBP16.26■□□□□ 0.19
SNX13-205ENST00000471744 HOXB8P17481 243 aaPredicted RBP16.26■□□□□ 0.19
SNX13-205ENST00000471744 GTF2F1P35269 517 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNX13-205ENST00000471744 CLCN4P51793 760 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 STX17P56962 302 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 ZACNQ401N2 412 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 CTXN3Q4LDR2 81 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 TMEM130Q8N3G9 435 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 SLC22A17Q8WUG5 538 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 HDAC7Q8WUI4 952 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 ZNF516Q92618 1163 aa16.26■□□□□ 0.19
SNX13-205ENST00000471744 OR6C75A6NL08 312 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 DLG4P78352 724 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms