RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
VPS16-206ENST00000466415 IKBKEQ14164 716 aa13□□□□□ -0.33
VPS16-206ENST00000466415 MTF1Q14872 753 aa13□□□□□ -0.33
VPS16-206ENST00000466415 SPA17Q15506 151 aa13□□□□□ -0.33
VPS16-206ENST00000466415 HGSNATQ68CP4 663 aa13□□□□□ -0.33
VPS16-206ENST00000466415 FAM71AQ8IYT1 594 aa13□□□□□ -0.33
VPS16-206ENST00000466415 RPUSD2Q8IZ73 545 aaKnown RBP13□□□□□ -0.33
VPS16-206ENST00000466415 TMEM130Q8N3G9 435 aa13□□□□□ -0.33
VPS16-206ENST00000466415 TTC39CQ8N584 583 aa13□□□□□ -0.33
VPS16-206ENST00000466415 MMS19Q96T76 1030 aa13□□□□□ -0.33
VPS16-206ENST00000466415 CYP3A43Q9HB55 503 aa13□□□□□ -0.33
VPS16-206ENST00000466415 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
VPS16-206ENST00000466415 LUC7LQ9NQ29 371 aaKnown RBP13□□□□□ -0.33
VPS16-206ENST00000466415 SEPT11Q9NVA2 429 aaKnown RBP13□□□□□ -0.33
VPS16-206ENST00000466415 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
VPS16-206ENST00000466415 ANO9A1A5B4 782 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 CASTOR2A6NHX0 329 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 PODXLO00592 558 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 CYP26A1O43174 497 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 NDUFA10O95299 355 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 PFKMP08237 780 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 KRT83P78385 493 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 PTK2Q05397 1052 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 RNASELQ05823 741 aaKnown RBP12.99□□□□□ -0.33
VPS16-206ENST00000466415 SOX4Q06945 474 aaPredicted RBP12.99□□□□□ -0.33
VPS16-206ENST00000466415 NOMO2Q5JPE7 1267 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 SCARA3Q6AZY7 606 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 MFSD5Q6N075 450 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 TMEM270Q6UE05 265 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 TOGARAM2Q6ZUX3 1019 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 IRF2BP2Q7Z5L9 587 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 NPAS4Q8IUM7 802 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 TXLNBQ8N3L3 684 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
VPS16-206ENST00000466415 CXorf38Q8TB03 319 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 KIAA1524Q8TCG1 905 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 TRIM43Q96BQ3 446 aaPredicted RBP12.99□□□□□ -0.33
VPS16-206ENST00000466415 UROC1Q96N76 676 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 FAM193BQ96PV7 902 aaPredicted RBP12.99□□□□□ -0.33
VPS16-206ENST00000466415 DESI2Q9BSY9 194 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 CISHQ9NSE2 258 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.99□□□□□ -0.33
VPS16-206ENST00000466415 KANSL3Q9P2N6 904 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 SNX9Q9Y5X1 595 aa12.99□□□□□ -0.33
VPS16-206ENST00000466415 EPN1Q9Y6I3 576 aaPredicted RBP12.99□□□□□ -0.33
VPS16-206ENST00000466415 EIF3CLB5ME19 914 aaKnown RBP12.98□□□□□ -0.33
VPS16-206ENST00000466415 PIRO00625 290 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 PPEF2O14830 753 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 INPPL1O15357 1258 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 EFCAB14O75071 495 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 WEE2P0C1S8 567 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 FGFR1P11362 822 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 TNFAIP3P21580 790 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 RPL9P32969 192 aaKnown RBP12.98□□□□□ -0.33
VPS16-206ENST00000466415 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 TUSC3Q13454 348 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 SMYD5Q6GMV2 418 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 KIAA1328Q86T90 577 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 C7orf61Q8IZ16 206 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 ACRBPQ8NEB7 543 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 GSTCDQ8NEC7 633 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 RSPH1Q8WYR4 309 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
VPS16-206ENST00000466415 EIF3CQ99613 913 aaKnown RBP12.98□□□□□ -0.33
VPS16-206ENST00000466415 HTATIP2Q9BUP3 242 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 MRPL9Q9BYD2 267 aaKnown RBP12.98□□□□□ -0.33
VPS16-206ENST00000466415 BCO2Q9BYV7 579 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 DNAI2Q9GZS0 605 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 PDCL3Q9H2J4 239 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 SPTLC3Q9NUV7 552 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 MIOSQ9NXC5 875 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 PUF60Q9UHX1 559 aaKnown RBP12.98□□□□□ -0.33
VPS16-206ENST00000466415 PPP2R2CQ9Y2T4 447 aa12.98□□□□□ -0.33
VPS16-206ENST00000466415 SCN5AQ14524 2016 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 ABHD14A-ACY1A0A1B0GW23 586 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 GOLGA6L9A6NEM1 432 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 HUS1O60921 280 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 AMHP03971 560 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 CSF2RAP15509 400 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 CYP11B1P15538 503 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 ACO1P21399 889 aaKnown RBP12.97□□□□□ -0.33
VPS16-206ENST00000466415 GNA15P30679 374 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 CLCNKBP51801 687 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 AFF1P51825 1210 aaKnown RBP12.97□□□□□ -0.33
VPS16-206ENST00000466415 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.337e-9■■■■□ 22.3
VPS16-206ENST00000466415 BMS1Q14692 1282 aaKnown RBP12.97□□□□□ -0.33
VPS16-206ENST00000466415 TCTN1Q2MV58 587 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 ZNF571Q7Z3V5 609 aaPredicted RBP12.97□□□□□ -0.33
VPS16-206ENST00000466415 UBR7Q8N806 425 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 AGPAT1Q99943 283 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 FAM124BQ9H5Z6 455 aaPredicted RBP12.97□□□□□ -0.33
VPS16-206ENST00000466415 TRMT1Q9NXH9 659 aaKnown RBP12.97□□□□□ -0.33
VPS16-206ENST00000466415 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
VPS16-206ENST00000466415 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms