RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 RUFY4Q6ZNE9 571 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 SND1Q7KZF4 910 aaKnown RBP eCLIP19.49■□□□□ 0.714e-20■■■□□ 14.9
COL9A3-205ENST00000466192 PASD1Q8IV76 773 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 MCOLN2Q8IZK6 566 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 C1orf127Q8N9H9 656 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 IFT81Q8WYA0 676 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 BTBD6Q96KE9 485 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 DDX47Q9H0S4 455 aaKnown RBP19.49■□□□□ 0.71
COL9A3-205ENST00000466192 ACBD3Q9H3P7 528 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 GDF3Q9NR23 364 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 CISHQ9NSE2 258 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 UVRAGQ9P2Y5 699 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 THAP12O43422 761 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 MYL3P08590 195 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 WEE2P0C1S8 567 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 CARSP49589 748 aaKnown RBP19.49■□□□□ 0.71
COL9A3-205ENST00000466192 ADAM17P78536 824 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 ZNF211Q13398 564 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-205ENST00000466192 ALG3Q92685 438 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 AP5M1Q9H0R1 490 aa19.49■□□□□ 0.71
COL9A3-205ENST00000466192 ABT1Q9ULW3 272 aaKnown RBP19.49■□□□□ 0.71
COL9A3-205ENST00000466192 SMIM35A0A1B0GVV1 85 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 KRT19P08727 400 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 CYP2C9P11712 490 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 COMTP21964 271 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 TNFRSF8P28908 595 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 TM4SF4P48230 202 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 EPHB4P54760 987 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 POU5F1Q01860 360 aaKnown RBP19.48■□□□□ 0.71
COL9A3-205ENST00000466192 SCARA5Q6ZMJ2 495 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 CXorf38Q8TB03 319 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 RNPC3Q96LT9 517 aaKnown RBP19.48■□□□□ 0.71
COL9A3-205ENST00000466192 CARD9Q9H257 536 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 ASB7Q9H672 318 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 POLIQ9UNA4 740 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 Q9Y3F1 56 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 RALGAPA2Q2PPJ7 1873 aa19.48■□□□□ 0.71
COL9A3-205ENST00000466192 SART1O43290 800 aaKnown RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 HOXA11P31270 313 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 NSFP46459 744 aaKnown RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 NOMO3P69849 1222 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 TRADDQ15628 312 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 C2CD6Q53TS8 623 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 TRIM72Q6ZMU5 477 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 CPNE8Q86YQ8 564 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 ZNF606Q8WXB4 792 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 KRT35Q92764 455 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 GCOM2Q9BZD3 368 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 NFU1Q9UMS0 254 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 CA12O43570 354 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 ITGB3P05106 788 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 RRM1P23921 792 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 MARCKSL1P49006 195 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 GYS2P54840 703 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 KYAT1Q16773 422 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 KCTD19Q17RG1 926 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 ZNF394Q53GI3 561 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 HSP90B2PQ58FF3 399 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 LLGL2Q6P1M3 1020 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 MON1BQ7L1V2 547 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 ZNF771Q7L3S4 317 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 ADAT2Q7Z6V5 191 aaKnown RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 TRPV1Q8NER1 839 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 RPS6KC1Q96S38 1066 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 OSMRQ99650 979 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 ADPGKQ9BRR6 497 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 ARHGAP39Q9C0H5 1083 aa19.47■□□□□ 0.71
COL9A3-205ENST00000466192 NXF1Q9UBU9 619 aaKnown RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 TTC7AQ9ULT0 858 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-205ENST00000466192 CCDC188H7C350 402 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 TREHO43280 583 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 ZNF200P98182 395 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-205ENST00000466192 EMBQ6PCB8 327 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 PHLDB2Q86SQ0 1253 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 DNAJB3Q8WWF6 145 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 CASKIN2Q8WXE0 1202 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 ACAP3Q96P50 834 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 ZSWIM1Q9BR11 485 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 AVENQ9NQS1 362 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-205ENST00000466192 NR2E1Q9Y466 385 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 MROH7Q68CQ1 1323 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 CDC42EP1Q00587 391 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 FSCN1Q16658 493 aaKnown RBP19.46■□□□□ 0.71
COL9A3-205ENST00000466192 AADACL2Q6P093 401 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 UBL4BQ8N7F7 174 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 CD101Q93033 1021 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 AMACRQ9UHK6 382 aa19.46■□□□□ 0.71
COL9A3-205ENST00000466192 MIF4GDA9UHW6 222 aaKnown RBP19.45■□□□□ 0.7
COL9A3-205ENST00000466192 MYBL1P10243 752 aa19.45■□□□□ 0.7
COL9A3-205ENST00000466192 RAP1GAPP47736 663 aa19.45■□□□□ 0.7
COL9A3-205ENST00000466192 WDR72Q3MJ13 1102 aa19.45■□□□□ 0.7
COL9A3-205ENST00000466192 CATSPER4Q7RTX7 472 aa19.45■□□□□ 0.7
COL9A3-205ENST00000466192 MYADML2A6NDP7 307 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 NPTXRO95502 500 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 AKR1A1P14550 325 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 DARSP14868 501 aaKnown RBP19.44■□□□□ 0.7
COL9A3-205ENST00000466192 BRD2P25440 801 aaKnown RBP19.44■□□□□ 0.7
COL9A3-205ENST00000466192 GRM5P41594 1212 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 GUCY2FP51841 1108 aa19.44■□□□□ 0.7
COL9A3-205ENST00000466192 FAM193AP78312 1265 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms