RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 POMKQ9H5K3 350 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 PTPRDP23468 1912 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 TULP1O00294 542 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-206ENST00000465877 SPTLC1O15269 473 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
COL5A1-206ENST00000465877 RFPL2O75678 378 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 KIF20AO95235 890 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 POLR2BP30876 1174 aaKnown RBP13.94□□□□□ -0.18
COL5A1-206ENST00000465877 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-206ENST00000465877 OR1D2P34982 312 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 MTHFRP42898 656 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 TAF6P49848 677 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 YWHAHQ04917 246 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-206ENST00000465877 CYP24A1Q07973 514 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 RAB33AQ14088 237 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 SV2CQ496J9 727 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 LIN9Q5TKA1 542 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 SLC8B1Q6J4K2 584 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 LILRA6Q6PI73 481 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 DSTYKQ6XUX3 929 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 C15orf39Q6ZRI6 1047 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 WDR49Q8IV35 697 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 C1orf127Q8N9H9 656 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 KREMEN2Q8NCW0 462 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 APPL2Q8NEU8 664 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 TIGD1Q96MW7 591 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 PHF7Q9BWX1 381 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-206ENST00000465877 CD320Q9NPF0 282 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 ZDHHC7Q9NXF8 308 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 ITGA11Q9UKX5 1188 aa13.94□□□□□ -0.18
COL5A1-206ENST00000465877 NOTCH4Q99466 2003 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 OBSL1O75147 1896 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 WDR27A2RRH5 827 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 H7C4K7 107 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 PDXKO00764 312 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 TBC1D4O60343 1298 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 EXOC3O60645 756 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 C8AP07357 584 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 PAX3P23760 479 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 MRPL58Q14197 206 aaKnown RBP13.93□□□□□ -0.18
COL5A1-206ENST00000465877 SURF1Q15526 300 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 CTXN3Q4LDR2 81 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 GPR149Q86SP6 731 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 GJD3Q8N144 294 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
COL5A1-206ENST00000465877 CACTINQ8WUQ7 758 aaKnown RBP13.93□□□□□ -0.18
COL5A1-206ENST00000465877 ANKRD36BP1Q96IX9 119 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 CGRRF1Q99675 332 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 INTS13Q9NVM9 706 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 RMND1Q9NWS8 449 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 HOOK1Q9UJC3 728 aaKnown RBP13.93□□□□□ -0.18
COL5A1-206ENST00000465877 FBXL5Q9UKA1 691 aa13.93□□□□□ -0.18
COL5A1-206ENST00000465877 TIMM13Q9Y5L4 95 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-206ENST00000465877 ARHGEF37A1IGU5 675 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 ZMYND10O75800 440 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 PAPLNO95428 1278 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 NR3C1P04150 777 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 DLATP10515 647 aaKnown RBP13.92□□□□□ -0.18
COL5A1-206ENST00000465877 CPB1P15086 417 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 TYMPP19971 482 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 SP100P23497 879 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-206ENST00000465877 PNPLA4P41247 253 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 PSMD6Q15008 389 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 OVOS1Q6IE37 1185 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 CCDC149Q6ZUS6 474 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 USP37Q86T82 979 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 SLC9A9Q8IVB4 645 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 SMYD4Q8IYR2 804 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-206ENST00000465877 LRRC52Q8N7C0 313 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 RDH13Q8NBN7 331 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 OR5B17Q8NGF7 314 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 CXorf38Q8TB03 319 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 SLC7A14Q8TBB6 771 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 TMEM174Q8WUU8 243 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 ERCC4Q92889 916 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-206ENST00000465877 ZNF707Q96C28 371 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-206ENST00000465877 SENP8Q96LD8 212 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 FNBP1Q96RU3 617 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 RHOBTB2Q9BYZ6 727 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 SIX4Q9UIU6 781 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 MAPK8IP1Q9UQF2 711 aa13.92□□□□□ -0.18
COL5A1-206ENST00000465877 CLUHO75153 1309 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 CCDC195A0A1B0GUA6 201 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 LOC730098B7Z3J9 87 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-206ENST00000465877 PRPF40AO75400 957 aaKnown RBP13.91□□□□□ -0.18
COL5A1-206ENST00000465877 SMC2O95347 1197 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 TNNC2P02585 160 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 CYP11A1P05108 521 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 KRT19P08727 400 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 ARPP19P56211 112 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 UBE2HP62256 183 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 ZCWPW2Q504Y3 356 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 ATAT1Q5SQI0 421 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 SPATA20Q8TB22 786 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 SMG7Q92540 1137 aaKnown RBP13.91□□□□□ -0.18
COL5A1-206ENST00000465877 SMARCE1Q969G3 411 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 CCDC127Q96BQ5 260 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 RPGRIP1Q96KN7 1286 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms