RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 ZMYND10O75800 440 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 CNPP09543 421 aaKnown RBP11.6□□□□□ -0.55
NPHP3-203ENST00000465756 CCDC192P0DO97 292 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 GBP2P32456 591 aaPredicted RBP11.6□□□□□ -0.55
NPHP3-203ENST00000465756 IRS1P35568 1242 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 FKBP3Q00688 224 aaKnown RBP11.6□□□□□ -0.55
NPHP3-203ENST00000465756 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
NPHP3-203ENST00000465756 KIAA0319Q5VV43 1072 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 C9orf57Q5W0N0 161 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 MTSS1LQ765P7 747 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 GJD3Q8N144 294 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 CSGALNACT2Q8N6G5 542 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 TOP6BLQ8N6T0 577 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 HASPINQ8TF76 798 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 ZDHHC9Q9Y397 364 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 DLL1O00548 723 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 NR2F2P24468 414 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 GTF2H1P32780 548 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 OR1D2P34982 312 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 TPM4P67936 248 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 CBX2Q14781 532 aaPredicted RBP11.6□□□□□ -0.55
NPHP3-203ENST00000465756 CT47A1Q5JQC4 288 aaPredicted RBP11.6□□□□□ -0.55
NPHP3-203ENST00000465756 CCDC127Q96BQ5 260 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 TNIP3Q96KP6 325 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 UXTQ9UBK9 157 aaPredicted RBP11.6□□□□□ -0.55
NPHP3-203ENST00000465756 TNFRSF10AO00220 468 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 PER2O15055 1255 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 SLC16A3O15427 465 aaKnown RBP11.59□□□□□ -0.55
NPHP3-203ENST00000465756 TEX28O15482 410 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 ADAM9Q13443 819 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 SMAD2Q15796 467 aaKnown RBP11.59□□□□□ -0.55
NPHP3-203ENST00000465756 CTC1Q2NKJ3 1217 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 TCERG1LQ5VWI1 586 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 ALKAL1Q6UXT8 129 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 PALB2Q86YC2 1186 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 CEP63Q96MT8 703 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 MMS19Q96T76 1030 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 FAM124BQ9H5Z6 455 aaPredicted RBP11.59□□□□□ -0.55
NPHP3-203ENST00000465756 HSFX1Q9UBD0 423 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 USP15Q9Y4E8 981 aaPredicted RBP11.59□□□□□ -0.55
NPHP3-203ENST00000465756 KPNA7A9QM74 516 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 POLR2BP30876 1174 aaKnown RBP11.59□□□□□ -0.55
NPHP3-203ENST00000465756 DPYDQ12882 1025 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 E2F7Q96AV8 911 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 CYP4F11Q9HBI6 524 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 PCDHB5Q9Y5E4 795 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 A0A087X0B3 334 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 C8AP07357 584 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 ADRB2P07550 413 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 CYP24A1Q07973 514 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
NPHP3-203ENST00000465756 STRA6Q9BX79 667 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
NPHP3-203ENST00000465756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.59□□□□□ -0.55
NPHP3-203ENST00000465756 TDRD15B5MCY1 1934 aaKnown RBP11.58□□□□□ -0.56
NPHP3-203ENST00000465756 PRRC2BQ5JSZ5 2229 aaKnown RBP11.58□□□□□ -0.56
NPHP3-203ENST00000465756 CLIC2O15247 247 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 PTPN2P17706 415 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 PIK3CAP42336 1068 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 COL19A1Q14993 1142 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 SASS6Q6UVJ0 657 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 EPM2AIP1Q7L775 607 aaPredicted RBP11.58□□□□□ -0.56
NPHP3-203ENST00000465756 GPR149Q86SP6 731 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 ZNF461Q8TAF7 563 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 SCFD1Q8WVM8 642 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 HPDLQ96IR7 371 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 CBWD1Q9BRT8 395 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 GPR62Q9BZJ7 368 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 BARX2Q9UMQ3 279 aaPredicted RBP11.58□□□□□ -0.56
NPHP3-203ENST00000465756 TRAF3IP3Q9Y228 551 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 CDY1Q9Y6F8 540 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 IKBKBO14920 756 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 CCNE1P24864 410 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 BRCC3P46736 316 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 CLUL1Q15846 466 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 SGSM1Q2NKQ1 1148 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 ZNF699Q32M78 642 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 FOXR2Q6PJQ5 311 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 SPATA2LQ8IUW3 424 aaPredicted RBP11.58□□□□□ -0.56
NPHP3-203ENST00000465756 MLKLQ8NB16 471 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 RDH13Q8NBN7 331 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 NAT10Q9H0A0 1025 aaKnown RBP11.58□□□□□ -0.56
NPHP3-203ENST00000465756 IGSF9Q9P2J2 1179 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 ARMCX3Q9UH62 379 aaPredicted RBP11.58□□□□□ -0.56
NPHP3-203ENST00000465756 DPYSL4O14531 572 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 ABLIM1O14639 778 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 ITGB3P05106 788 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 NFICP08651 508 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 SEZ6Q53EL9 994 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 COBLL1Q53SF7 1204 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 SLC22A17Q8WUG5 538 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 FAXDC2Q96IV6 333 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 CEP295NLQ96MC4 621 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 FBXW11Q9UKB1 542 aa11.58□□□□□ -0.56
NPHP3-203ENST00000465756 CITO14578 2027 aa11.57□□□□□ -0.56
NPHP3-203ENST00000465756 HIDE1A8MVS5 230 aa11.57□□□□□ -0.56
NPHP3-203ENST00000465756 M0QZQ0 153 aa11.57□□□□□ -0.56
NPHP3-203ENST00000465756 LETM1O95202 739 aaPredicted RBP11.57□□□□□ -0.56
NPHP3-203ENST00000465756 GLYCTKQ8IVS8 523 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms