RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 LRRC3Q9BY71 257 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
GPNMB-206ENST00000465673 DNAJC25Q9H1X3 360 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 SLITRK6Q9H5Y7 841 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 TRPV5Q9NQA5 729 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 DDX19AQ9NUU7 478 aaKnown RBP11.28□□□□□ -0.6
GPNMB-206ENST00000465673 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 CNTN3Q9P232 1028 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
GPNMB-206ENST00000465673 YIPF1Q9Y548 306 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 ZFHX4Q86UP3 3567 aa11.28□□□□□ -0.6
GPNMB-206ENST00000465673 K7ESF4 209 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 SLC16A4O15374 487 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 SOAT2O75908 522 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 MCF2P10911 925 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 PROZP22891 400 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 RPL9P32969 192 aaKnown RBP11.27□□□□□ -0.61
GPNMB-206ENST00000465673 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 KPNA1P52294 538 aaPredicted RBP11.27□□□□□ -0.61
GPNMB-206ENST00000465673 EPHA5P54756 1037 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 RAD51AP2Q09MP3 1159 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 DUSP4Q13115 394 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 MAPK7Q13164 816 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 TTC38Q5R3I4 469 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 ZNF280DQ6N043 979 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 PRR23CQ6ZRP0 262 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 KCNK18Q7Z418 384 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 APBB1IPQ7Z5R6 666 aaPredicted RBP11.27□□□□□ -0.61
GPNMB-206ENST00000465673 TMC8Q8IU68 726 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 TTC9BQ8N6N2 239 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 NETO1Q8TDF5 533 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 DEPDC1BQ8WUY9 529 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 TRPV4Q9HBA0 871 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 KMT5AQ9NQR1 393 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 ASAH2Q9NR71 780 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 GTSE1Q9NYZ3 720 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 ARHGAP28Q9P2N2 729 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 ANKFY1Q9P2R3 1169 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 LRWD1Q9UFC0 647 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 RALYQ9UKM9 306 aaKnown RBP11.27□□□□□ -0.61
GPNMB-206ENST00000465673 SLC27A5Q9Y2P5 690 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 PHLPP2Q6ZVD8 1323 aa11.27□□□□□ -0.61
GPNMB-206ENST00000465673 USP24Q9UPU5 2620 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 MARCKSP29966 332 aaPredicted RBP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 PXNP49023 591 aaPredicted RBP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 NEK4P51957 841 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 TNK2Q07912 1038 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 PTGDRQ13258 359 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 PPP2R5DQ14738 602 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 SAFBQ15424 915 aaKnown RBP eCLIP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 SF3A2Q15428 464 aaKnown RBP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 CSRP2Q16527 193 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 IL17AQ16552 155 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 HAUS3Q68CZ6 603 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 PKN3Q6P5Z2 889 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 MPZL3Q6UWV2 235 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 ARID3BQ8IVW6 561 aaPredicted RBP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 YAF2Q8IY57 180 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 SPEM1Q8N4L4 309 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 FAM160A2Q8N612 972 aaPredicted RBP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 ATAD1Q8NBU5 361 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 CSGALNACT1Q8TDX6 532 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 SNX29Q8TEQ0 813 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 CHAMP1Q96JM3 812 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 TMEM209Q96SK2 561 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 HAPLN2Q9GZV7 340 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 RXFP3Q9NSD7 469 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 POLR3BQ9NW08 1133 aaPredicted RBP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 PCDHB8Q9UN66 801 aa11.26□□□□□ -0.61
GPNMB-206ENST00000465673 CNOT1A5YKK6 2376 aaKnown RBP11.26□□□□□ -0.61
GPNMB-206ENST00000465673 SPECC1L-ADORA2AF8WAN1 911 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 PPEF2O14830 753 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 AXIN1O15169 862 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 CHADO15335 359 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 EXTL3O43909 919 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 CXCL8P10145 99 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 CTHP32929 405 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
GPNMB-206ENST00000465673 ANAPC15P60006 121 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 YWHAHQ04917 246 aaPredicted RBP11.25□□□□□ -0.61
GPNMB-206ENST00000465673 DMP1Q13316 513 aaPredicted RBP11.25□□□□□ -0.61
GPNMB-206ENST00000465673 PON2Q15165 354 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 RINT1Q6NUQ1 792 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 C1orf186Q6ZWK4 172 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 GAREM2Q75VX8 874 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 LONP2Q86WA8 852 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 CCDC83Q8IWF9 413 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 APPL2Q8NEU8 664 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 BEST2Q8NFU1 509 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 C8orf76Q96K31 380 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 IER2Q9BTL4 223 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 SMG9Q9H0W8 520 aaKnown RBP11.25□□□□□ -0.61
GPNMB-206ENST00000465673 CACNA1GO43497 2377 aa11.25□□□□□ -0.61
GPNMB-206ENST00000465673 MYBPHLA2RUH7 354 aa11.24□□□□□ -0.61
GPNMB-206ENST00000465673 M0QZQ0 153 aa11.24□□□□□ -0.61
GPNMB-206ENST00000465673 OAZ2O95190 189 aa11.24□□□□□ -0.61
GPNMB-206ENST00000465673 PRAMEF12O95522 483 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms