RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 LILRA4P59901 499 aa20.46■□□□□ 0.87
SF3A1-205ENST00000463818 DNAJC19Q96DA6 116 aa20.46■□□□□ 0.87
SF3A1-205ENST00000463818 TCEAL4Q96EI5 215 aa20.46■□□□□ 0.87
SF3A1-205ENST00000463818 ZNF512Q96ME7 567 aaPredicted RBP20.46■□□□□ 0.87
SF3A1-205ENST00000463818 STRA6Q9BX79 667 aa20.46■□□□□ 0.87
SF3A1-205ENST00000463818 OXCT2Q9BYC2 517 aaPredicted RBP20.46■□□□□ 0.87
SF3A1-205ENST00000463818 IKZF4Q9H2S9 585 aa20.46■□□□□ 0.87
SF3A1-205ENST00000463818 ASB7Q9H672 318 aa20.46■□□□□ 0.87
SF3A1-205ENST00000463818 AGO2Q9UKV8 859 aaKnown RBP20.46■□□□□ 0.87
SF3A1-205ENST00000463818 MORC2Q9Y6X9 1032 aaPredicted RBP20.46■□□□□ 0.87
SF3A1-205ENST00000463818 MYH11P35749 1972 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 CITO14578 2027 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 ZNF197O14709 1029 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 NFICP08651 508 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 OR4Q2P0C623 313 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 CEBPBP17676 345 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 TWF1Q12792 350 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 SNW1Q13573 536 aaKnown RBP20.45■□□□□ 0.86
SF3A1-205ENST00000463818 TMEM132DQ14C87 1099 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 SLC44A4Q53GD3 710 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 PRSS36Q5K4E3 855 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 CYP4A22Q5TCH4 519 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 C9orf57Q5W0N0 161 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 IQCEQ6IPM2 695 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 CCDC73Q6ZRK6 1079 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 HS6ST3Q8IZP7 471 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 ELMOD1Q8N336 334 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 SHDQ96IW2 340 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 SENP8Q96LD8 212 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 PLA2G2FQ9BZM2 168 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 MRPL44Q9H9J2 332 aaKnown RBP20.45■□□□□ 0.86
SF3A1-205ENST00000463818 TBC1D7Q9P0N9 293 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 CEP72Q9P209 647 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 SEL1LQ9UBV2 794 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 DERAQ9Y315 318 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 SIT1Q9Y3P8 196 aa20.45■□□□□ 0.86
SF3A1-205ENST00000463818 OR6C75A6NL08 312 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 PROB1E7EW31 1015 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 PIRO00625 290 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 SPTLC1O15269 473 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 GFRA3O60609 400 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 ECI2O75521 394 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 PPP1R37O75864 691 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 DCNP07585 359 aaKnown RBP20.44■□□□□ 0.86
SF3A1-205ENST00000463818 GAP43P17677 238 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 TYMPP19971 482 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 ADSSP30520 456 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 NBL1P41271 181 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 CCR2P41597 374 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 STARD6P59095 220 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 GPR17Q13304 367 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 POSTNQ15063 836 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 ANGPT1Q15389 498 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 PDZD4Q76G19 769 aaPredicted RBP20.44■□□□□ 0.86
SF3A1-205ENST00000463818 HVCN1Q96D96 273 aa20.44■□□□□ 0.86
SF3A1-205ENST00000463818 A0A087X0B3 334 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 ANO9A1A5B4 782 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 MICAL2O94851 1124 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 VNN2O95498 520 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 PAX3P23760 479 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 STAT6P42226 847 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 KCNA1Q09470 495 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 TANGO2Q6ICL3 276 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 OVOS1Q6IE37 1185 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 CRELD2Q6UXH1 353 aaPredicted RBP20.43■□□□□ 0.86
SF3A1-205ENST00000463818 POMGNT1Q8WZA1 660 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 PGLYRP2Q96PD5 576 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 ACCSQ96QU6 501 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 EXOC7Q9UPT5 735 aa20.43■□□□□ 0.86
SF3A1-205ENST00000463818 ZFHX2Q9C0A1 2572 aaPredicted RBP20.42■□□□□ 0.86
SF3A1-205ENST00000463818 NRG2O14511 850 aaPredicted RBP20.42■□□□□ 0.86
SF3A1-205ENST00000463818 ODC1P11926 461 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 MYL4P12829 197 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 IDEP14735 1019 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 NASPP49321 788 aaPredicted RBP20.42■□□□□ 0.86
SF3A1-205ENST00000463818 PFKPQ01813 784 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 POU5F1Q01860 360 aaKnown RBP20.42■□□□□ 0.86
SF3A1-205ENST00000463818 DUSP4Q13115 394 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 MYBPC2Q14324 1141 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 STK38Q15208 465 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 MLF2Q15773 248 aaPredicted RBP20.42■□□□□ 0.86
SF3A1-205ENST00000463818 L1TD1Q5T7N2 865 aaKnown RBP20.42■□□□□ 0.86
SF3A1-205ENST00000463818 ARMCX5Q6P1M9 558 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 FRMD5Q7Z6J6 570 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 FOXQ1Q9C009 403 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 DPP3Q9NY33 737 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 TFIP11Q9UBB9 837 aaKnown RBP20.42■□□□□ 0.86
SF3A1-205ENST00000463818 C2CD2Q9Y426 696 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 PCDHB13Q9Y5F0 798 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 NOTCH4Q99466 2003 aa20.42■□□□□ 0.86
SF3A1-205ENST00000463818 MOSPD3O75425 235 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 GCNT3O95395 438 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 PRKCQQ04759 706 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 FAM78AQ5JUQ0 283 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 CENPPQ6IPU0 288 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 PDILTQ8N807 584 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 ATAD1Q8NBU5 361 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 LINC00301Q8NCQ3 95 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 ELSPBP1Q96BH3 223 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 ZSWIM3Q96MP5 696 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms