RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 YME1L1Q96TA2 773 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 DNAJC7Q99615 494 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 RAD9AQ99638 391 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.45□□□□□ -0.586e-6■■□□□ 11.7
RTF1-202ENST00000462276 BCO2Q9BYV7 579 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 CXCL16Q9H2A7 254 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 AAASQ9NRG9 546 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 AIPL1Q9NZN9 384 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 DSEQ9UL01 958 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 NUB1Q9Y5A7 615 aa11.45□□□□□ -0.58
RTF1-202ENST00000462276 TTC3P53804 2025 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 HUS1O60921 280 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 MFAP3LO75121 409 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 TACC1O75410 805 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 UPP2O95045 317 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 PTMAP06454 111 aaKnown RBP11.44□□□□□ -0.58
RTF1-202ENST00000462276 FERP16591 822 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 ATP2A2P16615 1042 aaKnown RBP11.44□□□□□ -0.58
RTF1-202ENST00000462276 LAG3P18627 525 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 ANXA13P27216 316 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 CASP14P31944 242 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 KLK7P49862 253 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 GUCY2FP51841 1108 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 EPHB4P54760 987 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 JAM2P57087 298 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 LRMPQ12912 555 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 DRAP1Q14919 205 aaPredicted RBP11.44□□□□□ -0.58
RTF1-202ENST00000462276 IQCEQ6IPM2 695 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 RRAGAQ7L523 313 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 LIMS2Q7Z4I7 341 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 HERC6Q8IVU3 1022 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 FAM71AQ8IYT1 594 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 TMEM86AQ8N2M4 240 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 SPC24Q8NBT2 197 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 CCDC112Q8NEF3 446 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 SHC3Q92529 594 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 BAP1Q92560 729 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 TATDN2Q93075 761 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 ZBED2Q9BTP6 218 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 PI4K2AQ9BTU6 479 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 NRDE2Q9H7Z3 1164 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 RC3H2Q9HBD1 1191 aaKnown RBP11.44□□□□□ -0.58
RTF1-202ENST00000462276 APOBEC3GQ9HC16 384 aaKnown RBP11.44□□□□□ -0.58
RTF1-202ENST00000462276 NXF1Q9UBU9 619 aaKnown RBP11.44□□□□□ -0.58
RTF1-202ENST00000462276 KIAA1257Q9ULG3 409 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 CNTN6Q9UQ52 1028 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 FAN1Q9Y2M0 1017 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
RTF1-202ENST00000462276 CASTOR2A6NHX0 329 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 F8VZ95 297 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 EPHB6O15197 1021 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 TADA2AO75478 443 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 DDHD2O94830 711 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 CLSTN1O94985 981 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 GALTP07902 379 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 SOX5P35711 763 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 PPM1AP35813 382 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 MAGEA10P43363 369 aaPredicted RBP11.43□□□□□ -0.58
RTF1-202ENST00000462276 ASPAP45381 313 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 LHX1P48742 406 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 FXR1P51114 621 aaKnown RBP eCLIP11.43□□□□□ -0.58
RTF1-202ENST00000462276 CLCNKBP51801 687 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 DEFB103AP81534 67 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 RAPGEF1Q13905 1077 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
RTF1-202ENST00000462276 SFMBT2Q5VUG0 894 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 PDXDC1Q6P996 788 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 CCDC186Q7Z3E2 898 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 UNC93AQ86WB7 457 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 ZNF280BQ86YH2 543 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 APPL2Q8NEU8 664 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 CPLX3Q8WVH0 158 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 SUSD3Q96L08 255 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 MMS19Q96T76 1030 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 OXCT2Q9BYC2 517 aaPredicted RBP11.43□□□□□ -0.58
RTF1-202ENST00000462276 NLRC4Q9NPP4 1024 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
RTF1-202ENST00000462276 RWDD3Q9Y3V2 267 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 SNX9Q9Y5X1 595 aa11.43□□□□□ -0.58
RTF1-202ENST00000462276 M0QZQ0 153 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 FOXN3O00409 490 aaPredicted RBP11.42□□□□□ -0.58
RTF1-202ENST00000462276 CYB561D2O14569 222 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 NRP1O14786 923 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 SYN3O14994 580 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 GFPT2O94808 682 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 CYP11A1P05108 521 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 PAEPP09466 180 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 ODC1P11926 461 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 TYMPP19971 482 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 FECHP22830 423 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 BMP8BP34820 402 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 PRKCIP41743 596 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 OR1G1P47890 313 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 PTK2Q05397 1052 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 INCA1Q0VD86 236 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 MEA1Q16626 185 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 HS1BP3Q53T59 392 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 SPOPLQ6IQ16 392 aa11.42□□□□□ -0.58
RTF1-202ENST00000462276 DSTYKQ6XUX3 929 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms