RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 CXorf38Q8TB03 319 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PLEKHO2Q8TD55 490 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 AUTS2Q8WXX7 1259 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 RIN2Q8WYP3 895 aaPredicted RBP12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 EEF2KMTQ96G04 330 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 POP1Q99575 1024 aaKnown RBP12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 FNIP2Q9P278 1114 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ARMCX3Q9UH62 379 aaPredicted RBP12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SIX4Q9UIU6 781 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PCDHB8Q9UN66 801 aa12.57□□□□□ -0.4
TRAF3IP1-204ENST00000462122 REV3LO60673 3130 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 KPNA7A9QM74 516 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 H7C4K7 107 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 I3L4J1 428 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SPTLC1O15269 473 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PHACTR2O75167 634 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 LETM1O95202 739 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 STAU1O95793 577 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ADH1AP07327 375 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SRGAP2BP0DMP2 458 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TYMPP19971 482 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 GTF2H1P32780 548 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 NRIP1P48552 1158 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DLG4P78352 724 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 HYAL1Q12794 435 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 BIRC3Q13489 604 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TRPC3Q13507 836 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CCDC85BQ15834 202 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PSMD5Q16401 504 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 STX1AQ16623 288 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 FRMD5Q7Z6J6 570 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ADGRD2Q7Z7M1 963 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 RBM23Q86U06 439 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PPFIBP1Q86W92 1011 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TMEM130Q8N3G9 435 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 EFHBQ8N7U6 833 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 LNX1Q8TBB1 728 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ZNF516Q92618 1163 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 BORCS6Q96GS4 357 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 B3GALT6Q96L58 329 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SENP8Q96LD8 212 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 OXCT2Q9BYC2 517 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ANO10Q9NW15 660 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MTRRQ9UBK8 725 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DSEQ9UL01 958 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 BACE2Q9Y5Z0 518 aa12.56□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PRUNE2Q8WUY3 3088 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TEX28O15482 410 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 C1RP00736 705 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 C4BPAP04003 597 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CNPP09543 421 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TRIM49P0CI25 452 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TRIM49CP0CI26 452 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 KLRC2P26717 231 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ATICP31939 592 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 NDUFV1P49821 464 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MARSP56192 900 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 YWHAHQ04917 246 aaPredicted RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 COL19A1Q14993 1142 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SKIV2LQ15477 1246 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TPD52L1Q16890 204 aaPredicted RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ZACNQ401N2 412 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 VARS2Q5ST30 1063 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TDRD10Q5VZ19 366 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 ZNF280DQ6N043 979 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SV2AQ7L0J3 742 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PABPC5Q96DU9 382 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 HPDLQ96IR7 371 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 FAM84AQ96KN4 292 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 KLHL5Q96PQ7 755 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SRRTQ9BXP5 876 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TMEM8AQ9HCN3 771 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 GDAP2Q9NXN4 497 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 COG5Q9UP83 839 aa12.55□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CYB561D2O14569 222 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PER2O15055 1255 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CLASP2O75122 1294 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 OAZ2O95190 189 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CST3P01034 146 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CYP11A1P05108 521 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MXI1P50539 228 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 NCOA4Q13772 614 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 MRPL58Q14197 206 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 CTC1Q2NKJ3 1217 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DCAF17Q5H9S7 520 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 C1orf220Q5T0J3 134 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TCERG1LQ5VWI1 586 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 KRT39Q6A163 491 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 PRSS55Q6UWB4 352 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 C15orf39Q6ZRI6 1047 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 DPH6Q7L8W6 267 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TOP6BLQ8N6T0 577 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 SPATA18Q8TC71 538 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 TAF4BQ92750 862 aa12.54□□□□□ -0.4
TRAF3IP1-204ENST00000462122 IGFLR1Q9H665 355 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms