RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 PDZD4Q76G19 769 aaPredicted RBP19.43■□□□□ 0.7
SSB-206ENST00000461708 LRRC15Q8TF66 581 aa19.43■□□□□ 0.7
SSB-206ENST00000461708 RAD54LQ92698 747 aa19.43■□□□□ 0.7
SSB-206ENST00000461708 CLDN23Q96B33 292 aa19.43■□□□□ 0.7
SSB-206ENST00000461708 ASB16Q96NS5 453 aa19.43■□□□□ 0.7
SSB-206ENST00000461708 CCSER1Q9C0I3 900 aa19.43■□□□□ 0.7
SSB-206ENST00000461708 ST6GALNAC4Q9H4F1 302 aa19.43■□□□□ 0.7
SSB-206ENST00000461708 RPF1Q9H9Y2 349 aaKnown RBP19.43■□□□□ 0.7
SSB-206ENST00000461708 CEP250Q9BV73 2442 aa19.43■□□□□ 0.7
SSB-206ENST00000461708 DMXL1Q9Y485 3027 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 LACTBL1A8MY62 500 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 K7ENM7 598 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 CPB1P15086 417 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 TYMPP19971 482 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 TNFSF9P41273 254 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 FOXK2Q01167 660 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 POU5F1Q01860 360 aaKnown RBP19.42■□□□□ 0.7
SSB-206ENST00000461708 FAM78AQ5JUQ0 283 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 ZBTB41Q5SVQ8 909 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 SPATA1Q5VX52 437 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 RNF19BQ6ZMZ0 732 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 MAP4K3Q8IVH8 894 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 TCEAL4Q96EI5 215 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 FIZ1Q96SL8 496 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 MSTO1Q9BUK6 570 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 PLA2G2FQ9BZM2 168 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 TRPV4Q9HBA0 871 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 ZFP14Q9HCL3 533 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 LTB4R2Q9NPC1 389 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 TRPV5Q9NQA5 729 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 CEP72Q9P209 647 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 CPSF3Q9UKF6 684 aaKnown RBP19.42■□□□□ 0.7
SSB-206ENST00000461708 FBXO4Q9UKT5 387 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 MRPS17Q9Y2R5 130 aaKnown RBP19.42■□□□□ 0.7
SSB-206ENST00000461708 DERAQ9Y315 318 aa19.42■□□□□ 0.7
SSB-206ENST00000461708 FAM170BA6NMN3 283 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 NCAM2O15394 837 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 CCR2P41597 374 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 RPS9P46781 194 aaKnown RBP19.41■□□□□ 0.7
SSB-206ENST00000461708 SPAG1Q07617 926 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 TWF1Q12792 350 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 GPR17Q13304 367 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 PLD1Q13393 1074 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 MYBPC2Q14324 1141 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 MCM6Q14566 821 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 ZNF852Q6ZMS4 543 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 USP37Q86T82 979 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 MAML2Q8IZL2 1156 aaPredicted RBP19.41■□□□□ 0.7
SSB-206ENST00000461708 SMARCD2Q92925 531 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 GPR88Q9GZN0 384 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 ASAH2Q9NR71 780 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 HSFX1Q9UBD0 423 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 PATJQ8NI35 1801 aa19.41■□□□□ 0.7
SSB-206ENST00000461708 LRRN2O75325 713 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 TBCAO75347 108 aaKnown RBP19.4■□□□□ 0.7
SSB-206ENST00000461708 MOSPD3O75425 235 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 KRT18P05783 430 aaKnown RBP19.4■□□□□ 0.7
SSB-206ENST00000461708 PDCP20941 246 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 DDIT3P35638 169 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 LILRA4P59901 499 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 UBXN2BQ14CS0 331 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 KARSQ15046 597 aaKnown RBP19.4■□□□□ 0.7
SSB-206ENST00000461708 SF3A1Q15459 793 aaKnown RBP19.4■□□□□ 0.7
SSB-206ENST00000461708 SLFN12LQ6IEE8 588 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 SLC39A4Q6P5W5 647 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 DSTYKQ6XUX3 929 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 TPRG1Q6ZUI0 275 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 RASSF8Q8NHQ8 419 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 LARP4BQ92615 738 aaKnown RBP19.4■□□□□ 0.7
SSB-206ENST00000461708 ASB7Q9H672 318 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 MTF2Q9Y483 593 aaPredicted RBP19.4■□□□□ 0.7
SSB-206ENST00000461708 YIPF1Q9Y548 306 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 STYXL1Q9Y6J8 313 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 R4GN57 208 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 DCHS1Q96JQ0 3298 aa19.4■□□□□ 0.7
SSB-206ENST00000461708 VNN2O95498 520 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 MLLT6P55198 1093 aaPredicted RBP19.39■□□□□ 0.69
SSB-206ENST00000461708 GRIN1Q05586 938 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 CUL4AQ13619 759 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 DHX8Q14562 1220 aaKnown RBP19.39■□□□□ 0.69
SSB-206ENST00000461708 OVOS1Q6IE37 1185 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 KCNG4Q8TDN1 519 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 DEPDC1BQ8WUY9 529 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 IRF7Q92985 503 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 E2F7Q96AV8 911 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 TRMT61BQ9BVS5 477 aaKnown RBP19.39■□□□□ 0.69
SSB-206ENST00000461708 SPATA6Q9NWH7 488 aaPredicted RBP19.39■□□□□ 0.69
SSB-206ENST00000461708 STK17AQ9UEE5 414 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 C2CD2Q9Y426 696 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 ASB3Q9Y575 518 aa19.39■□□□□ 0.69
SSB-206ENST00000461708 PIRO00625 290 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 MAN2B1O00754 1011 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 LAMTOR5O43504 91 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 CYP11A1P05108 521 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 ODC1P11926 461 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 ANK1P16157 1881 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 PSMC3P17980 439 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 EPHB3P54753 998 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 JADE1Q6IE81 842 aa19.38■□□□□ 0.69
SSB-206ENST00000461708 CENPPQ6IPU0 288 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms