RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 B4GALT4O60513 344 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 SLC43A1O75387 559 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 TCEA3O75764 348 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 MATN4O95460 622 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 POMCP01189 267 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 MYL3P08590 195 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 FPR1P21462 350 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 KCNJ5P48544 419 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 PRIM2P49643 509 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 PPP2CBP62714 309 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 PPP2CAP67775 309 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 STK3Q13188 491 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 DHX8Q14562 1220 aaKnown RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 TBC1D10BQ4KMP7 808 aaPredicted RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 C4orf46Q504U0 113 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 FKBP15Q5T1M5 1219 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 C10orf62Q5T681 223 aaPredicted RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 IZUMO3Q5VZ72 239 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 XRRA1Q6P2D8 792 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 DRICH1Q6PGQ1 229 aaPredicted RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 FAM111BQ6SJ93 734 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 SH2D3CQ8N5H7 860 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 PARD3BQ8TEW8 1205 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 BRI3BPQ8WY22 251 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 RAB24Q969Q5 203 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 CEP95Q96GE4 821 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 MRGPRX1Q96LB2 322 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 ZNF512Q96ME7 567 aaPredicted RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 RIPOR3Q96MK2 946 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 SSBP3Q9BWW4 388 aaPredicted RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 BRIP1Q9BX63 1249 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 REXO4Q9GZR2 422 aaKnown RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 KCNH6Q9H252 994 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 C12orf65Q9H3J6 166 aaKnown RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 DEF6Q9H4E7 631 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 LDAHQ9H6V9 325 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 CERS4Q9HA82 394 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 RSAD1Q9HA92 442 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 TRMT13Q9NUP7 481 aaKnown RBP3.71□□□□□ -1.82
HDAC6-212ENST00000461608 STAP2Q9UGK3 403 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 CORO2BQ9UQ03 480 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 HDAC5Q9UQL6 1122 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 LRCH1Q9Y2L9 728 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 DAAM1Q9Y4D1 1078 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 PLEKHM1Q9Y4G2 1056 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 SLC30A1Q9Y6M5 507 aa3.71□□□□□ -1.82
HDAC6-212ENST00000461608 TBKBP1A7MCY6 615 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 TBX3O15119 743 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 CYP27B1O15528 508 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 HOXA3O43365 443 aaPredicted RBP3.7□□□□□ -1.82
HDAC6-212ENST00000461608 CREB3O43889 395 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 MFAP3LO75121 409 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 PARP1P09874 1014 aaKnown RBP3.7□□□□□ -1.82
HDAC6-212ENST00000461608 KITP10721 976 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 XRCC6P12956 609 aaKnown RBP eCLIP3.7□□□□□ -1.82
HDAC6-212ENST00000461608 TSHRP16473 764 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 KLRC1P26715 233 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 PIK3CBP42338 1070 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 STT3AP46977 705 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 ARFIP2P53365 341 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 INHBEP58166 350 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 SATB1Q01826 763 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 PDCD2Q16342 344 aaPredicted RBP3.7□□□□□ -1.82
HDAC6-212ENST00000461608 BMT2Q1RMZ1 405 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 HSP90AB4PQ58FF6 505 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 MFSD14BQ5SR56 506 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 ATXN7L2Q5T6C5 722 aaPredicted RBP3.7□□□□□ -1.82
HDAC6-212ENST00000461608 LMBRD2Q68DH5 695 aaPredicted RBP3.7□□□□□ -1.82
HDAC6-212ENST00000461608 ZNF529Q6P280 563 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 C1orf228Q6PIY5 440 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 PPP1R3BQ86XI6 285 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 ANKRD35Q8N283 1001 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 FITM2Q8N6M3 262 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 TNPO1Q92973 898 aaKnown RBP3.7□□□□□ -1.82
HDAC6-212ENST00000461608 SCAMP4Q969E2 229 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 NT5C1BQ96P26 610 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 MOGAT1Q96PD6 335 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 ARPC5LQ9BPX5 153 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 NDC1Q9BTX1 674 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 APOL5Q9BWW9 433 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 ZNF341Q9BYN7 854 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 ZNF518BQ9C0D4 1074 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 PCED1AQ9H1Q7 454 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 GPR35Q9HC97 309 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 SLC23A1Q9UHI7 598 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 CPA4Q9UI42 421 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 RUVBL1Q9Y265 456 aaKnown RBP3.7□□□□□ -1.82
HDAC6-212ENST00000461608 PCDHA1Q9Y5I3 950 aa3.7□□□□□ -1.82
HDAC6-212ENST00000461608 ZMYM3Q14202 1370 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 TRIM43BA6NCK2 446 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 CLCA1A8K7I4 914 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 DIRC3C9JPN6 131 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 KIAA0391O15091 583 aaKnown RBP3.69□□□□□ -1.82
HDAC6-212ENST00000461608 KPNA5O15131 536 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 THAP12O43422 761 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 TBC1D4O60343 1298 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 RAD17O75943 681 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 INMTO95050 263 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 ABHD16AO95870 558 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms