RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 EXOC3L4Q17RC7 722 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 SGSM1Q2NKQ1 1148 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 SV2CQ496J9 727 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 TJAP1Q5JTD0 557 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 C1orf220Q5T0J3 134 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 TDRD10Q5VZ19 366 aaKnown RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 C9orf57Q5W0N0 161 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 LMBRD2Q68DH5 695 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 DCLRE1AQ6PJP8 1040 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 SARM1Q6SZW1 724 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 C15orf39Q6ZRI6 1047 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 OR5B17Q8NGF7 314 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 PLEKHO2Q8TD55 490 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 ANP32BQ92688 251 aaKnown RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 C18orf25Q96B23 403 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 FAXDC2Q96IV6 333 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 ZNF558Q96NG5 402 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 SAMD11Q96NU1 681 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 TRIM5Q9C035 493 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 DNAI2Q9GZS0 605 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 RAB20Q9NX57 234 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 MIOSQ9NXC5 875 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 GCNT4Q9P109 453 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 TUBGCP4Q9UGJ1 667 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 MSRAQ9UJ68 235 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 AGAP1Q9UPQ3 857 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 FAN1Q9Y2M0 1017 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 COQ4Q9Y3A0 265 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 DAAM1Q9Y4D1 1078 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 NUB1Q9Y5A7 615 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 PCDHB12Q9Y5F1 795 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 PCDHA11Q9Y5I1 949 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 FNDC1Q4ZHG4 1894 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 A0A1W2PQC6 194 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 ANO9A1A5B4 782 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 CASTOR2A6NHX0 329 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 TMEM189-UBE2V1I3L0A0 370 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 PODXLO00592 558 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 MEFVO15553 781 aaPredicted RBP8.16□□□□□ -1.1
ABCA4-202ENST00000460514 B3GAT3O94766 335 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 STAU1O95793 577 aaKnown RBP8.16□□□□□ -1.1
ABCA4-202ENST00000460514 HLA-DRAP01903 254 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 TRIM21P19474 475 aaKnown RBP8.16□□□□□ -1.1
ABCA4-202ENST00000460514 RFX1P22670 979 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 OR1G1P47890 313 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 GATMP50440 423 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 WNT7BP56706 349 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 YWHAEP62258 255 aaKnown RBP8.16□□□□□ -1.1
ABCA4-202ENST00000460514 TNNC1P63316 161 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 PTPRJQ12913 1337 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 ELAVL2Q12926 359 aaKnown RBP8.16□□□□□ -1.1
ABCA4-202ENST00000460514 COL4A6Q14031 1691 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 NAB2Q15742 525 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 UPP1Q16831 310 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 ZNF699Q32M78 642 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 CBWD6Q4V339 395 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 ZNF667Q5HYK9 610 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 MIIPQ5JXC2 388 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 PDE4DIPQ5VU43 2346 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 COLGALT2Q8IYK4 626 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 TTC39CQ8N584 583 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 ZNF516Q92618 1163 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 IQCDQ96DY2 449 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 HPDLQ96IR7 371 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 NT5C1BQ96P26 610 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 ERGIC2Q96RQ1 377 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 FAM124BQ9H5Z6 455 aaPredicted RBP8.16□□□□□ -1.1
ABCA4-202ENST00000460514 NRDE2Q9H7Z3 1164 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 VRTNQ9H8Y1 702 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 RC3H2Q9HBD1 1191 aaKnown RBP8.16□□□□□ -1.1
ABCA4-202ENST00000460514 IFNKQ9P0W0 207 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 PLAGL2Q9UPG8 496 aa8.16□□□□□ -1.1
ABCA4-202ENST00000460514 SF3B1O75533 1304 aaKnown RBP eCLIP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 PIRO00625 290 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 TADA2AO75478 443 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 DDHD2O94830 711 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 ASS1P00966 412 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 GALTP07902 379 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 TPM1P09493 284 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 TBXAS1P24557 533 aaPredicted RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 MRE11P49959 708 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 CLCNKBP51801 687 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 AFF1P51825 1210 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 GUCY2FP51841 1108 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 BCAR1P56945 870 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 NOP14P78316 857 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 KRT17Q04695 432 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 SOX4Q06945 474 aaPredicted RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 BMS1Q14692 1282 aaKnown RBP8.15□□□□□ -1.1
ABCA4-202ENST00000460514 NR1I3Q14994 352 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 EPC2Q52LR7 807 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 KCNT2Q6UVM3 1135 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 DSTYKQ6XUX3 929 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 TRIM67Q6ZTA4 783 aa8.15□□□□□ -1.1
ABCA4-202ENST00000460514 ENOSF1Q7L5Y1 443 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms