RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 MRPL17Q9NRX2 175 aaKnown RBP13.83□□□□□ -0.2
COL18A1-206ENST00000459895 DACH1Q9UI36 760 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 PCDHB8Q9UN66 801 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 IRAK3Q9Y616 596 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 C2orf16Q68DN1 1984 aa13.83□□□□□ -0.2
COL18A1-206ENST00000459895 SYN3O14994 580 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 PER2O15055 1255 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 LILRB3O75022 631 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 VNN1O95497 513 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 CNPP09543 421 aaKnown RBP13.82□□□□□ -0.2
COL18A1-206ENST00000459895 ODC1P11926 461 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 PNPLA4P41247 253 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 PIK3CAP42336 1068 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 GCLMP48507 274 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 NFKBIBQ15653 356 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 DUSP6Q16828 381 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 ZACNQ401N2 412 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 VARS2Q5ST30 1063 aaKnown RBP13.82□□□□□ -0.2
COL18A1-206ENST00000459895 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 SASS6Q6UVJ0 657 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 C15orf39Q6ZRI6 1047 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 GLYCTKQ8IVS8 523 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 MRPL43Q8N983 215 aaKnown RBP13.82□□□□□ -0.2
COL18A1-206ENST00000459895 SLC35C1Q96A29 364 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 ELMO3Q96BJ8 720 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 SENP8Q96LD8 212 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
COL18A1-206ENST00000459895 DNAJC25Q9H1X3 360 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 MTRRQ9UBK8 725 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 TIMM13Q9Y5L4 95 aaPredicted RBP13.82□□□□□ -0.2
COL18A1-206ENST00000459895 MYO7AQ13402 2215 aa13.82□□□□□ -0.2
COL18A1-206ENST00000459895 SYCE3A1L190 88 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 TEX28O15482 410 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 ADAM12O43184 909 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 TRAPPC3O43617 180 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 CLASP2O75122 1294 aaKnown RBP13.81□□□□□ -0.2
COL18A1-206ENST00000459895 CXCL14O95715 111 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 MXI1P50539 228 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 MYL6P60660 151 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 RBP5P82980 135 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 ENPEPQ07075 957 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 COL19A1Q14993 1142 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 TCERG1LQ5VWI1 586 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 LLGL2Q6P1M3 1020 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 USP37Q86T82 979 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 LNX1Q8TBB1 728 aaPredicted RBP13.81□□□□□ -0.2
COL18A1-206ENST00000459895 PPP2R3CQ969Q6 453 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 XYLT2Q9H1B5 865 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 TLE6Q9H808 572 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 PRDM6Q9NQX0 595 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 ANO10Q9NW15 660 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
COL18A1-206ENST00000459895 L1RE1Q9UN81 338 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 PTPRDP23468 1912 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 UNC80Q8N2C7 3258 aa13.81□□□□□ -0.2
COL18A1-206ENST00000459895 MTCL1Q9Y4B5 1905 aaKnown RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 KPNA7A9QM74 516 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 PHACTR2O75167 634 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 CLSTN1O94985 981 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 HLA-DRAP01903 254 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 C4BPAP04003 597 aaKnown RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 EPCAMP16422 314 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 NDUFV1P49821 464 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 AP3M2P53677 418 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 MARSP56192 900 aaKnown RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 MCCD1P59942 119 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 MYL7Q01449 175 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 CREMQ03060 361 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 NCOA4Q13772 614 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 SKIV2LQ15477 1246 aaKnown RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 ZNF699Q32M78 642 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 CBWD6Q4V339 395 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 HSP90AA4PQ58FG1 418 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 CBWD3Q5JTY5 395 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 CBWD5Q5RIA9 395 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 ZNF280DQ6N043 979 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 RSPO2Q6UXX9 243 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 SCARA5Q6ZMJ2 495 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 SV2AQ7L0J3 742 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 EFHBQ8N7U6 833 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 TAS1R2Q8TE23 839 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 HPDLQ96IR7 371 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 KLHL5Q96PQ7 755 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 SRRTQ9BXP5 876 aaKnown RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 IGFLR1Q9H665 355 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 RXFP1Q9HBX9 757 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 BARX2Q9UMQ3 279 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-206ENST00000459895 HCFC2Q9Y5Z7 792 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 PATJQ8NI35 1801 aa13.8□□□□□ -0.2
COL18A1-206ENST00000459895 IKBKBO14920 756 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 CST3P01034 146 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-206ENST00000459895 CYP11A1P05108 521 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 ADH1AP07327 375 aa13.79□□□□□ -0.2
COL18A1-206ENST00000459895 TYMPP19971 482 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms