RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 ACSF2Q96CM8 615 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-217ENST00000459625 GLT1D1Q96MS3 346 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 CCDC3Q9BQI4 270 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 SERPINB4P48594 390 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 SHROOM1Q2M3G4 852 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-217ENST00000459625 MIB1Q86YT6 1006 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 BBS2Q9BXC9 721 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 CHST12Q9NRB3 414 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 SPATS2LQ9NUQ6 558 aaKnown RBP16.8■□□□□ 0.28
HDAC7-217ENST00000459625 NDE1Q9NXR1 346 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 SSH2Q76I76 1423 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 CPDO75976 1380 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 CASP8Q14790 479 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 E2F4Q16254 413 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 ENAHQ8N8S7 591 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-217ENST00000459625 FAM20AQ96MK3 541 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 RAB6BQ9NRW1 208 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 UTP6Q9NYH9 597 aaKnown RBP16.8■□□□□ 0.28
HDAC7-217ENST00000459625 PCDHGA4Q9Y5G9 962 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 FHOD1Q9Y613 1164 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 RNASEH1O60930 286 aaKnown RBP16.8■□□□□ 0.28
HDAC7-217ENST00000459625 HIST2H2ACQ16777 129 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-217ENST00000459625 CEP78Q5JTW2 689 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 ARHGAP17Q68EM7 881 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 HIST2H2AA3Q6FI13 130 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 ZNF438Q7Z4V0 828 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 EXO5Q9H790 373 aa16.8■□□□□ 0.28
HDAC7-217ENST00000459625 SCP2P22307 547 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 DGKDQ16760 1214 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 GPRC5AQ8NFJ5 357 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 BLOC1S5Q8TDH9 187 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 XPO7Q9UIA9 1087 aaKnown RBP16.79■□□□□ 0.28
HDAC7-217ENST00000459625 MFAP3LO75121 409 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 MAP3K7CLP57077 242 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 ARID5BQ14865 1188 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 SEZ6Q53EL9 994 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 WWOXQ9NZC7 414 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 HDAC6Q9UBN7 1215 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 CCDC81Q6ZN84 652 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 AHCYL2Q96HN2 611 aaKnown RBP16.79■□□□□ 0.28
HDAC7-217ENST00000459625 SLITRK1Q96PX8 696 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
HDAC7-217ENST00000459625 SENP2Q9HC62 589 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
HDAC7-217ENST00000459625 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 C17orf102A2RUQ5 167 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 CFAP99D6REC4 459 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 PSMD14O00487 310 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 CDC25BP30305 580 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 GMPSP49915 693 aaPredicted RBP16.79■□□□□ 0.28
HDAC7-217ENST00000459625 MED15Q96RN5 788 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 ZNRF3Q9ULT6 936 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 DCDC2CA8MYV0 355 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 CKMP06732 381 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 HNRNPCP07910 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
HDAC7-217ENST00000459625 CPT1AP50416 773 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 BCL2L14Q9BZR8 327 aa16.79■□□□□ 0.28
HDAC7-217ENST00000459625 SV2CQ496J9 727 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 NOL9Q5SY16 702 aaKnown RBP16.78■□□□□ 0.28
HDAC7-217ENST00000459625 TMEM245Q9H330 911 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.78■□□□□ 0.28
HDAC7-217ENST00000459625 LINC00854A0A1B0GVQ3 168 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 RASSF10A6NK89 507 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 PCYT1AP49585 367 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 ZNF177Q13360 481 aaPredicted RBP16.78■□□□□ 0.28
HDAC7-217ENST00000459625 DIS3Q9Y2L1 958 aaKnown RBP16.78■□□□□ 0.28
HDAC7-217ENST00000459625 YWHAZP63104 245 aaKnown RBP16.78■□□□□ 0.28
HDAC7-217ENST00000459625 KCNV1Q6PIU1 500 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 TMEM117Q9H0C3 514 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 PMPCBO75439 489 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 EFNA5P52803 228 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 CCDC15Q0P6D6 951 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 NCOA4Q13772 614 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 PGS1Q32NB8 556 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 ARL6IP4Q66PJ3 421 aaKnown RBP16.78■□□□□ 0.28
HDAC7-217ENST00000459625 GALNT4Q8N4A0 578 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 SGF29Q96ES7 293 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 DEPDC7Q96QD5 511 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 TBC1D4O60343 1298 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 CAMK2GQ13555 558 aaPredicted RBP16.78■□□□□ 0.28
HDAC7-217ENST00000459625 TRIP4Q15650 581 aaPredicted RBP16.78■□□□□ 0.28
HDAC7-217ENST00000459625 RGL4Q8IZJ4 473 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 RNF14Q9UBS8 474 aa16.78■□□□□ 0.28
HDAC7-217ENST00000459625 DYRK3O43781 588 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 PQBP1O60828 265 aaKnown RBP16.77■□□□□ 0.28
HDAC7-217ENST00000459625 RGS4P49798 205 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 NME5P56597 212 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 P3H1Q32P28 736 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 SPATA18Q8TC71 538 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 DDI1Q8WTU0 396 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 ASZ1Q8WWH4 475 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 PI4K2AQ9BTU6 479 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 YIPF3Q9GZM5 350 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 PRR12Q9ULL5 1215 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 DAB1O75553 588 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 MYBL1P10243 752 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 KYAT1Q16773 422 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 LUZP2Q86TE4 346 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 DTX3LQ8TDB6 740 aa16.77■□□□□ 0.28
HDAC7-217ENST00000459625 TRIM16O95361 564 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms