RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-215ENST00000457039 CST3P01034 146 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-215ENST00000457039 KRT19P08727 400 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 TYRO3Q06418 890 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 HYAL1Q12794 435 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 MRPL58Q14197 206 aaKnown RBP15.23■□□□□ 0.03
SMPD4-215ENST00000457039 BMS1Q14692 1282 aaKnown RBP15.23■□□□□ 0.03
SMPD4-215ENST00000457039 DUSP6Q16828 381 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 C11orf57Q6ZUT1 292 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-215ENST00000457039 SV2AQ7L0J3 742 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 IRF2BP1Q8IU81 584 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 RIN2Q8WYP3 895 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-215ENST00000457039 SENP8Q96LD8 212 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 FUCA2Q9BTY2 467 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 METTL14Q9HCE5 456 aaKnown RBP15.23■□□□□ 0.03
SMPD4-215ENST00000457039 ANO10Q9NW15 660 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 ARMCX3Q9UH62 379 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-215ENST00000457039 SSX2IPQ9Y2D8 614 aa15.23■□□□□ 0.03
SMPD4-215ENST00000457039 KPNA7A9QM74 516 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 C2CD2LO14523 706 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 TBC1D4O60343 1298 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 VNN1O95497 513 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 STAU1O95793 577 aaKnown RBP15.22■□□□□ 0.03
SMPD4-215ENST00000457039 GNA14O95837 355 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 CNPP09543 421 aaKnown RBP15.22■□□□□ 0.03
SMPD4-215ENST00000457039 TYMPP19971 482 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 GTF2H1P32780 548 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 GTF2F1P35269 517 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMPD4-215ENST00000457039 KCNC3Q14003 757 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 SV2CQ496J9 727 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 KIAA1841Q6NSI8 718 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 PRSS55Q6UWB4 352 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-215ENST00000457039 MICALL1Q8N3F8 863 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 ENOX1Q8TC92 643 aaKnown RBP15.22■□□□□ 0.03
SMPD4-215ENST00000457039 SLC35C1Q96A29 364 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 KLHL5Q96PQ7 755 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 CDCA3Q99618 268 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-215ENST00000457039 XYLT2Q9H1B5 865 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMPD4-215ENST00000457039 GDAP2Q9NXN4 497 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 FNIP2Q9P278 1114 aa15.22■□□□□ 0.03
SMPD4-215ENST00000457039 PER2O15055 1255 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 TEX28O15482 410 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 CLASP2O75122 1294 aaKnown RBP15.21■□□□□ 0.03
SMPD4-215ENST00000457039 LETM1O95202 739 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-215ENST00000457039 FGFR1OPO95684 399 aaKnown RBP15.21■□□□□ 0.03
SMPD4-215ENST00000457039 CYP11A1P05108 521 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 GCLMP48507 274 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 NRIP1P48552 1158 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 CCDC85BQ15834 202 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-215ENST00000457039 PSMD5Q16401 504 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 CTC1Q2NKJ3 1217 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 CCDC40Q4G0X9 1142 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 VARS2Q5ST30 1063 aaKnown RBP15.21■□□□□ 0.03
SMPD4-215ENST00000457039 PDXDC1Q6P996 788 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 DSTYKQ6XUX3 929 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 LIMS2Q7Z4I7 341 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 CEP57Q86XR8 500 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 TRIM59Q8IWR1 403 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 APPL2Q8NEU8 664 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 MAFAQ8NHW3 353 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-215ENST00000457039 PPP2R3CQ969Q6 453 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 HPDLQ96IR7 371 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 CLSTN3Q9BQT9 956 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 THAP9Q9H5L6 903 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 TLE6Q9H808 572 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 VRTNQ9H8Y1 702 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 TMEM8AQ9HCN3 771 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 MTRRQ9UBK8 725 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 BACE2Q9Y5Z0 518 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 TSC2P49815 1807 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 PRUNE2Q8WUY3 3088 aa15.21■□□□□ 0.03
SMPD4-215ENST00000457039 SYCE3A1L190 88 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 CYB561D2O14569 222 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 OAZ2O95190 189 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 ODC1P11926 461 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 RPL17P18621 184 aaKnown RBP15.2■□□□□ 0.02
SMPD4-215ENST00000457039 ATICP31939 592 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 MYL6P60660 151 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 CREMQ03060 361 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 MYO1EQ12965 1108 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 BIRC3Q13489 604 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 NCOA4Q13772 614 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-215ENST00000457039 KRT39Q6A163 491 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 RSPO2Q6UXX9 243 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-215ENST00000457039 ANKS3Q6ZW76 656 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 RBM23Q86U06 439 aaKnown RBP15.2■□□□□ 0.02
SMPD4-215ENST00000457039 EFHBQ8N7U6 833 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 VN1R2Q8NFZ6 395 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 TAS1R2Q8TE23 839 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 EMILIN2Q9BXX0 1053 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 DNAJC25Q9H1X3 360 aa15.2■□□□□ 0.02
SMPD4-215ENST00000457039 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-215ENST00000457039 XIRP2A4UGR9 3374 aa15.19■□□□□ 0.02
SMPD4-215ENST00000457039 ARHGEF37A1IGU5 675 aa15.19■□□□□ 0.02
SMPD4-215ENST00000457039 PMM2O15305 246 aa15.19■□□□□ 0.02
SMPD4-215ENST00000457039 ADAM12O43184 909 aa15.19■□□□□ 0.02
SMPD4-215ENST00000457039 NCK2O43639 380 aa15.19■□□□□ 0.02
SMPD4-215ENST00000457039 STX10O60499 249 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms