RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 FAM81BQ96LP2 452 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 EDEM3Q9BZQ6 932 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 NIF3L1Q9GZT8 377 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 GDAP2Q9NXN4 497 aa17.82■□□□□ 0.44
CCDC90B-202ENST00000455220 A0A1W2PQJ5 194 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 B3GAT3O94766 335 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 KIF4AO95239 1232 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 GYPCP04921 128 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 GALTP07902 379 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 IGFBP6P24592 240 aaPredicted RBP17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 ASPAP45381 313 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 OR1G1P47890 313 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 SLC11A1P49279 550 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 WDR72Q3MJ13 1102 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 IQCEQ6IPM2 695 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 GJB7Q6PEY0 223 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 PDLIM2Q96JY6 352 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 ZBED2Q9BTP6 218 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 CEP72Q9P209 647 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 AJAP1Q9UKB5 411 aaPredicted RBP17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 FHOD1Q9Y613 1164 aa17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 MRPL42Q9Y6G3 142 aaKnown RBP17.81■□□□□ 0.44
CCDC90B-202ENST00000455220 CARNS1A5YM72 827 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 KPNA7A9QM74 516 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 NRP1O14786 923 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 ALDH2P05091 517 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 TBXAS1P24557 533 aaPredicted RBP17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 CUL2Q13617 745 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 SMYD5Q6GMV2 418 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 ENOSF1Q7L5Y1 443 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 LIMS2Q7Z4I7 341 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 PPM1KQ8N3J5 372 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 RABGGTAQ92696 567 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 KREMEN1Q96MU8 473 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 BCO2Q9BYV7 579 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 UBE2TQ9NPD8 197 aaPredicted RBP17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 DNAJC12Q9UKB3 198 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 KIAA1671Q9BY89 1806 aa17.8■□□□□ 0.44
CCDC90B-202ENST00000455220 TLL1O43897 1013 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 ITGB1P05556 798 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 LINC00271P0C7V0 271 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 P4HA1P13674 534 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 LAG3P18627 525 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 BCAR1P56945 870 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 POLR2FP61218 127 aaKnown RBP17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 RRAGAQ7L523 313 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 BAP1Q92560 729 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 CLP1Q92989 425 aaKnown RBP17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 KAT5Q92993 513 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 JAKMIP2Q96AA8 810 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 FAM124BQ9H5Z6 455 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 MARCH5Q9NX47 278 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 IMPACTQ9P2X3 320 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 NXF1Q9UBU9 619 aaKnown RBP17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 CAPN11Q9UMQ6 739 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 POLIQ9UNA4 740 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 FAN1Q9Y2M0 1017 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 PRG3Q9Y2Y8 225 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 F8W810 466 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 RNF225M0QZC1 329 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 MFAP3P55082 362 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 JAM2P57087 298 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 TNNC1P63316 161 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 DRC7Q8IY82 874 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 FIBCD1Q8N539 461 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 UBR7Q8N806 425 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 ARID3AQ99856 593 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 COLEC11Q9BWP8 271 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 STK33Q9BYT3 514 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 GPR88Q9GZN0 384 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 CYP3A43Q9HB55 503 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 SNX9Q9Y5X1 595 aa17.79■□□□□ 0.44
CCDC90B-202ENST00000455220 M0QZQ0 153 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 CLSTN1O94985 981 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 CASP14P31944 242 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 ALDH7A1P49419 539 aaKnown RBP17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 FXR1P51114 621 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 TIGD5Q53EQ6 642 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 FAM109BQ6ICB4 259 aaPredicted RBP17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 KCNT2Q6UVM3 1135 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 DPH6Q7L8W6 267 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 PPFIBP1Q86W92 1011 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 TOP6BLQ8N6T0 577 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 SHC3Q92529 594 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 SUSD3Q96L08 255 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 SENP8Q96LD8 212 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 ZNF558Q96NG5 402 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 NLRC4Q9NPP4 1024 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 ADAM28Q9UKQ2 775 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 MYO6Q9UM54 1294 aa17.78■□□□□ 0.44
CCDC90B-202ENST00000455220 GBF1Q92538 1859 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 LCHNA4D1U4 455 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 EFEMP2O95967 443 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 FAM163BP0C2L3 166 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 ACO1P21399 889 aaKnown RBP17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 PBX3P40426 434 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 ZBED6P86452 979 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 ARID5BQ14865 1188 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 SOWAHAQ2M3V2 549 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms