RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 LAG3P18627 525 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-206ENST00000454852 ASPAP45381 313 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 SLC11A1P49279 550 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 KLK7P49862 253 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 TMCO2Q7Z6W1 182 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-206ENST00000454852 RNF168Q8IYW5 571 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-206ENST00000454852 TOP6BLQ8N6T0 577 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 UBR7Q8N806 425 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 NEK11Q8NG66 645 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 PAAF1Q9BRP4 392 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 PI4K2AQ9BTU6 479 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 COLEC11Q9BWP8 271 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 LSM14BQ9BX40 385 aaKnown RBP12.08□□□□□ -0.48
TRAF4-206ENST00000454852 MARCH5Q9NX47 278 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 DNAJB4Q9UDY4 337 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 STK39Q9UEW8 545 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 CAPN11Q9UMQ6 739 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 CNTN6Q9UQ52 1028 aa12.08□□□□□ -0.48
TRAF4-206ENST00000454852 MRPL42Q9Y6G3 142 aaKnown RBP12.08□□□□□ -0.48
TRAF4-206ENST00000454852 KIAA1671Q9BY89 1806 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 ARHGEF37A1IGU5 675 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 EPHB6O15197 1021 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 B3GAT3O94766 335 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 KIF4AO95239 1232 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 GYPCP04921 128 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 CYP11A1P05108 521 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 TRIM21P19474 475 aaKnown RBP12.07□□□□□ -0.48
TRAF4-206ENST00000454852 TYMPP19971 482 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 BCAR1P56945 870 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 JAM2P57087 298 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 INCA1Q0VD86 236 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 ELAVL2Q12926 359 aaKnown RBP12.07□□□□□ -0.48
TRAF4-206ENST00000454852 CUL2Q13617 745 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 WDR72Q3MJ13 1102 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 IQCEQ6IPM2 695 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 ARHGEF19Q8IW93 802 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 GPR65Q8IYL9 337 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 SLC39A11Q8N1S5 342 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 TMEM130Q8N3G9 435 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 FIBCD1Q8N539 461 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 SHC3Q92529 594 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 BAP1Q92560 729 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 TATDN2Q93075 761 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 SUSD3Q96L08 255 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 KREMEN1Q96MU8 473 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 STK33Q9BYT3 514 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 NUCKS1Q9H1E3 243 aaKnown RBP12.07□□□□□ -0.48
TRAF4-206ENST00000454852 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 FAM207AQ9NSI2 230 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-206ENST00000454852 DNAJC12Q9UKB3 198 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 FAN1Q9Y2M0 1017 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 RWDD3Q9Y3V2 267 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 PCDHA11Q9Y5I1 949 aa12.07□□□□□ -0.48
TRAF4-206ENST00000454852 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 A0A1W2PPC1 479 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 SYN3O14994 580 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 TRAPPC3O43617 180 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 TLL1O43897 1013 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 ACO1P21399 889 aaKnown RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 HNRNPH3P31942 346 aaKnown RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 PPM1AP35813 382 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 OR1G1P47890 313 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 ALDH7A1P49419 539 aaKnown RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 MFAP3P55082 362 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 YWHAEP62258 255 aaKnown RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 MLLT1Q03111 559 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 PAN2Q504Q3 1202 aaKnown RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 TIGD5Q53EQ6 642 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 SPOPLQ6IQ16 392 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 FAM117BQ6P1L5 589 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 KCNT2Q6UVM3 1135 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 TMC6Q7Z403 805 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 TDHQ8IZJ6 230 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 TMEM86AQ8N2M4 240 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 PPM1KQ8N3J5 372 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 SYN2Q92777 582 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 IGSF21Q96ID5 467 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 SENP8Q96LD8 212 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-206ENST00000454852 ZNF558Q96NG5 402 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 GPR88Q9GZN0 384 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 HCSTQ9UBK5 93 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 ADAM28Q9UKQ2 775 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 DSEQ9UL01 958 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 FHOD1Q9Y613 1164 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 CEP290O15078 2479 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 TSC2P49815 1807 aa12.06□□□□□ -0.48
TRAF4-206ENST00000454852 C5orf67F2Z3F1 127 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 GABRDO14764 452 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 ITGB1P05556 798 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 WARSP23381 471 aaKnown RBP12.05□□□□□ -0.48
TRAF4-206ENST00000454852 IGFBP6P24592 240 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-206ENST00000454852 ZNF132P52740 706 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms