RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 NR2E1Q9Y466 385 aa26.91■■□□□ 1.9
MSH2-203ENST00000454849 C2orf16Q68DN1 1984 aa26.91■■□□□ 1.9
MSH2-203ENST00000454849 ANO9A1A5B4 782 aa26.9■■□□□ 1.9
MSH2-203ENST00000454849 WDR27A2RRH5 827 aa26.9■■□□□ 1.9
MSH2-203ENST00000454849 RPN1P04843 607 aaKnown RBP26.9■■□□□ 1.9
MSH2-203ENST00000454849 OR4Q2P0C623 313 aa26.9■■□□□ 1.9
MSH2-203ENST00000454849 NTHL1P78549 312 aa26.9■■□□□ 1.9
MSH2-203ENST00000454849 KIAA0895Q8NCT3 520 aa26.9■■□□□ 1.9
MSH2-203ENST00000454849 LIMD1Q9UGP4 676 aa26.9■■□□□ 1.9
MSH2-203ENST00000454849 GOLGA6L4A6NEF3 574 aa26.89■■□□□ 1.9
MSH2-203ENST00000454849 AARSP49588 968 aaKnown RBP eCLIP26.89■■□□□ 1.9
MSH2-203ENST00000454849 SLC8B1Q6J4K2 584 aa26.89■■□□□ 1.9
MSH2-203ENST00000454849 CCDC149Q6ZUS6 474 aa26.89■■□□□ 1.9
MSH2-203ENST00000454849 USP37Q86T82 979 aa26.89■■□□□ 1.9
MSH2-203ENST00000454849 TDRD5Q8NAT2 981 aaKnown RBP26.89■■□□□ 1.9
MSH2-203ENST00000454849 ZDHHC7Q9NXF8 308 aa26.89■■□□□ 1.9
MSH2-203ENST00000454849 MTCL1Q9Y4B5 1905 aaKnown RBP26.88■■□□□ 1.89
MSH2-203ENST00000454849 ZNF233A6NK53 670 aa26.88■■□□□ 1.89
MSH2-203ENST00000454849 C1RP00736 705 aa26.88■■□□□ 1.89
MSH2-203ENST00000454849 ASGR2P07307 311 aa26.88■■□□□ 1.89
MSH2-203ENST00000454849 ALADP13716 330 aa26.88■■□□□ 1.89
MSH2-203ENST00000454849 POLR2BP30876 1174 aaKnown RBP26.88■■□□□ 1.89
MSH2-203ENST00000454849 POU5F1Q01860 360 aaKnown RBP26.88■■□□□ 1.89
MSH2-203ENST00000454849 YWHAHQ04917 246 aaPredicted RBP26.88■■□□□ 1.89
MSH2-203ENST00000454849 KNOP1Q1ED39 458 aaKnown RBP26.88■■□□□ 1.89
MSH2-203ENST00000454849 ZNF280DQ6N043 979 aa26.88■■□□□ 1.89
MSH2-203ENST00000454849 GRASPQ7Z6J2 395 aaPredicted RBP26.88■■□□□ 1.89
MSH2-203ENST00000454849 ST13P5Q8NFI4 369 aaPredicted RBP26.88■■□□□ 1.89
MSH2-203ENST00000454849 C11orf16Q9NQ32 467 aa26.88■■□□□ 1.89
MSH2-203ENST00000454849 AGAP1Q9UPQ3 857 aa26.88■■□□□ 1.89
MSH2-203ENST00000454849 PTPRJQ12913 1337 aa26.88■■□□□ 1.89
MSH2-203ENST00000454849 SCN1AP35498 2009 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 N4BP1O75113 896 aaKnown RBP26.87■■□□□ 1.89
MSH2-203ENST00000454849 SEC24AO95486 1093 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 ITGB3P05106 788 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 CSGALNACT2Q8N6G5 542 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 C1orf127Q8N9H9 656 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 OR5B17Q8NGF7 314 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 ZNF461Q8TAF7 563 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 TMEM209Q96SK2 561 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 MTMR12Q9C0I1 747 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 WDR6Q9NNW5 1121 aaKnown RBP26.87■■□□□ 1.89
MSH2-203ENST00000454849 HCFC1R1Q9NWW0 138 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 MAPK8IP1Q9UQF2 711 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.87■■□□□ 1.89
MSH2-203ENST00000454849 CLUHO75153 1309 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 UBE4BO95155 1302 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 DOCK6Q96HP0 2047 aa26.87■■□□□ 1.89
MSH2-203ENST00000454849 CYB561D2O14569 222 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 PRRG1O14668 218 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 ABLIM3O94929 683 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 KRT19P08727 400 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 CPB1P15086 417 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 ELF1P32519 619 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 DPYDQ12882 1025 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 BMT2Q1RMZ1 405 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 OVOS1Q6IE37 1185 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 RNF19BQ6ZMZ0 732 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 HS2ST1Q7LGA3 356 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 CACTINQ8WUQ7 758 aaKnown RBP26.86■■□□□ 1.89
MSH2-203ENST00000454849 PGLYRP2Q96PD5 576 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 C1QTNF1Q9BXJ1 281 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 SMOC2Q9H3U7 446 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 CYP4F11Q9HBI6 524 aa26.86■■□□□ 1.89
MSH2-203ENST00000454849 OAZ2O95190 189 aa26.85■■□□□ 1.89
MSH2-203ENST00000454849 ODC1P11926 461 aa26.85■■□□□ 1.89
MSH2-203ENST00000454849 GBP2P32456 591 aaPredicted RBP26.85■■□□□ 1.89
MSH2-203ENST00000454849 TAF6P49848 677 aa26.85■■□□□ 1.89
MSH2-203ENST00000454849 ADCY1Q08828 1119 aa26.85■■□□□ 1.89
MSH2-203ENST00000454849 SNRNP35Q16560 246 aaKnown RBP26.85■■□□□ 1.89
MSH2-203ENST00000454849 CCDC127Q96BQ5 260 aa26.85■■□□□ 1.89
MSH2-203ENST00000454849 MYADMQ96S97 322 aa26.85■■□□□ 1.89
MSH2-203ENST00000454849 KIAA0391O15091 583 aaKnown RBP26.84■■□□□ 1.89
MSH2-203ENST00000454849 TMEM191BP0C7N4 346 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 DLATP10515 647 aaKnown RBP26.84■■□□□ 1.89
MSH2-203ENST00000454849 BFSP1Q12934 665 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 PSMD2Q13200 908 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 PNOCQ13519 176 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 WSCD1Q658N2 575 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 GET4Q7L5D6 327 aaPredicted RBP26.84■■□□□ 1.89
MSH2-203ENST00000454849 OTOP3Q7RTS5 596 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 NT5DC4Q86YG4 428 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 FMR1NBQ8N0W7 255 aaPredicted RBP26.84■■□□□ 1.89
MSH2-203ENST00000454849 XXYLT1Q8NBI6 393 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 ERCC4Q92889 916 aaPredicted RBP26.84■■□□□ 1.89
MSH2-203ENST00000454849 BORCS6Q96GS4 357 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 SIX4Q9UIU6 781 aa26.84■■□□□ 1.89
MSH2-203ENST00000454849 HNRNPA1P09651 372 aaKnown RBP eCLIP26.83■■□□□ 1.89
MSH2-203ENST00000454849 TYMPP19971 482 aa26.83■■□□□ 1.89
MSH2-203ENST00000454849 TMEM31Q5JXX7 168 aa26.83■■□□□ 1.89
MSH2-203ENST00000454849 CYP26C1Q6V0L0 522 aa26.83■■□□□ 1.89
MSH2-203ENST00000454849 ACSF2Q96CM8 615 aaPredicted RBP26.83■■□□□ 1.89
MSH2-203ENST00000454849 LRFN3Q9BTN0 628 aa26.83■■□□□ 1.89
MSH2-203ENST00000454849 INTS13Q9NVM9 706 aa26.83■■□□□ 1.89
MSH2-203ENST00000454849 MYO10Q9HD67 2058 aa26.83■■□□□ 1.89
MSH2-203ENST00000454849 KPNA7A9QM74 516 aa26.82■■□□□ 1.88
MSH2-203ENST00000454849 EXOC3O60645 756 aa26.82■■□□□ 1.88
MSH2-203ENST00000454849 MYL1P05976 194 aa26.82■■□□□ 1.88
MSH2-203ENST00000454849 ATF2P15336 505 aa26.82■■□□□ 1.88
MSH2-203ENST00000454849 ZXDAP98168 799 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms