RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 F8W8V4 182 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 BOLA2-SMG1P6H3BVE0 249 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 DDX39AO00148 427 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 BIN1O00499 593 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 PSMA7O14818 248 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 HNRNPDLO14979 420 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 SPTLC2O15270 562 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 PHGDHO43175 533 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 THAP12O43422 761 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 BEST1O76090 585 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 SCGB1D1O95968 90 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 HNRNPA1P09651 372 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 PCP11498 1178 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 MTHFD2P13995 350 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 BRAFP15056 766 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 GAP43P17677 238 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 MAPK3P27361 379 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLC7A1P30825 629 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 STAT5AP42229 794 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 RBP5P82980 135 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 AMPD2Q01433 879 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 MC1RQ01726 317 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 CREB5Q02930 508 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 ACVR2BQ13705 512 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 EFR3AQ14156 821 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 UBE3CQ15386 1083 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZNF674Q2M3X9 581 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 MUM1Q2TAK8 710 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLC9C2Q5TAH2 1124 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 MEX3CQ5U5Q3 659 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 CNKSR3Q6P9H4 555 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 FBXO38Q6PIJ6 1188 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 RSPO2Q6UXX9 243 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 TMTC3Q6ZXV5 915 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 CPLX4Q7Z7G2 160 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 SLFN11Q7Z7L1 901 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 ATG4DQ86TL0 474 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 RTN4RL1Q86UN2 441 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 TSPYL5Q86VY4 417 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 RNF168Q8IYW5 571 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 TAGAPQ8N103 731 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 OXR1Q8N573 874 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 USHBP1Q8N6Y0 703 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 ATP11CQ8NB49 1132 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 FLAD1Q8NFF5 587 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 OR10H5Q8NGA6 315 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 GABPB2Q8TAK5 448 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 BRSK1Q8TDC3 778 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 CREB3L4Q8TEY5 395 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 CTNNBL1Q8WYA6 563 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 ARHGEF2Q92974 986 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 UBE2FQ969M7 185 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 FBXW5Q969U6 566 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 FEM1CQ96JP0 617 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 C16orf45Q96MC5 204 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 KREMEN1Q96MU8 473 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 COG8Q96MW5 612 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 RUNDC3BQ96NL0 473 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 PDCD2LQ9BRP1 358 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 DDX23Q9BUQ8 820 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 BOCQ9BWV1 1114 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 BRIP1Q9BX63 1249 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 TEX13BQ9BXU2 312 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 GPR63Q9BZJ6 419 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 RABEP2Q9H5N1 569 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 PAPOLBQ9NRJ5 636 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 HOXC10Q9NYD6 342 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 LMCD1Q9NZU5 365 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 RAI14Q9P0K7 980 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 DKK3Q9UBP4 350 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 SRP68Q9UHB9 627 aaKnown RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZNF215Q9UL58 517 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 KCNH3Q9ULD8 1083 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 RNF114Q9Y508 228 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 TRIM17Q9Y577 477 aa4.85□□□□□ -1.63
HMGB3P21-201ENST00000452483 PASKQ96RG2 1323 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 A0A088AWK7 358 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 C2orf81A6NN90 581 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 PODXLO00592 558 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ZBTB43O43298 467 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 TXNL1O43396 289 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 KIF1CO43896 1103 aaKnown RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ERAL1O75616 437 aaKnown RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 USP1O94782 785 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ENDOD1O94919 500 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 APBB3O95704 486 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 FTLP02792 175 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 QDPRP09417 244 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CSH1P0DML2 217 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CSH2P0DML3 217 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 TNNT1P13805 278 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 FGFR2P21802 821 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ADSLP30566 484 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 MAPK4P31152 587 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 ARL3P36405 182 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 MLH1P40692 756 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CD151P48509 253 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 CCR5P51681 352 aa4.84□□□□□ -1.63
HMGB3P21-201ENST00000452483 BCAR1P56945 870 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms