RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ASB7Q9H672 318 aa13.54□□□□□ -0.24
CPSF4-208ENST00000452047 CYP4F11Q9HBI6 524 aa13.54□□□□□ -0.24
CPSF4-208ENST00000452047 AFF4Q9UHB7 1163 aaKnown RBP13.54□□□□□ -0.24
CPSF4-208ENST00000452047 FBXL21Q9UKT6 434 aa13.54□□□□□ -0.24
CPSF4-208ENST00000452047 C2CD2Q9Y426 696 aa13.54□□□□□ -0.24
CPSF4-208ENST00000452047 TIMM13Q9Y5L4 95 aaPredicted RBP13.54□□□□□ -0.24
CPSF4-208ENST00000452047 INSL5Q9Y5Q6 135 aa13.54□□□□□ -0.24
CPSF4-208ENST00000452047 WDR87Q6ZQQ6 2873 aa13.54□□□□□ -0.24
CPSF4-208ENST00000452047 TCHHQ07283 1943 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 ANO9A1A5B4 782 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 PIRO00625 290 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 SPTLC1O15269 473 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 SPTLC2O15270 562 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 VNN2O95498 520 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 YEATS4O95619 227 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 LRG1P02750 347 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 AOC1P19801 751 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 ELF1P32519 619 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 MRE11P49959 708 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 ADCY1Q08828 1119 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 E2F4Q16254 413 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
CPSF4-208ENST00000452047 C9orf57Q5W0N0 161 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 POTEHQ6S545 545 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 ALYREFQ86V81 257 aaKnown RBP13.53□□□□□ -0.24
CPSF4-208ENST00000452047 PDILTQ8N807 584 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 FLCNQ8NFG4 579 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 POMGNT1Q8WZA1 660 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 SLC2A4RGQ9NR83 387 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 TBC1D7Q9P0N9 293 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 TFIP11Q9UBB9 837 aaKnown RBP13.53□□□□□ -0.24
CPSF4-208ENST00000452047 MAFFQ9ULX9 164 aa13.53□□□□□ -0.24
CPSF4-208ENST00000452047 FRYLO94915 3013 aa13.52□□□□□ -0.24
CPSF4-208ENST00000452047 PI15O43692 258 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 GCNT3O95395 438 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 IDEP14735 1019 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 CPB1P15086 417 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 TYMPP19971 482 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 ALCAMQ13740 583 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 POSTNQ15063 836 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 PRSS36Q5K4E3 855 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 MTSS1LQ765P7 747 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 HSCBQ8IWL3 235 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 ING5Q8WYH8 240 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 SENP8Q96LD8 212 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 ZNF396Q96N95 335 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-208ENST00000452047 ACCSQ96QU6 501 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 OXCT2Q9BYC2 517 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-208ENST00000452047 TNMDQ9H2S6 317 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 KBTBD4Q9NVX7 518 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 MRPS23Q9Y3D9 190 aaKnown RBP13.52□□□□□ -0.25
CPSF4-208ENST00000452047 COL4A3Q01955 1670 aa13.52□□□□□ -0.25
CPSF4-208ENST00000452047 OR6C75A6NL08 312 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 NRG2O14511 850 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-208ENST00000452047 OR4Q2P0C623 313 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-208ENST00000452047 ODC1P11926 461 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 CEBPBP17676 345 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 PTPN2P17706 415 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 PAX3P23760 479 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 CCR2P41597 374 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 WNT7BP56706 349 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 TWF1Q12792 350 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 FOXD4L5Q5VV16 416 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-208ENST00000452047 OVOS1Q6IE37 1185 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 SHC4Q6S5L8 630 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 DSTYKQ6XUX3 929 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 USP37Q86T82 979 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 ZSWIM2Q8NEG5 633 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 FOXD4L4Q8WXT5 416 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-208ENST00000452047 TCEAL4Q96EI5 215 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 CORO1BQ9BR76 489 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 CRISPLD1Q9H336 500 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 ARHGEF3Q9NR81 526 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 PANK4Q9NVE7 773 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 GDE1Q9NZC3 331 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 CEP72Q9P209 647 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 EXOC7Q9UPT5 735 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 YIPF1Q9Y548 306 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
CPSF4-208ENST00000452047 H0Y858 1186 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 CUTAO60888 179 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 MICAL2O94851 1124 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 IL18RAPO95256 599 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 F13A1P00488 732 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 CYP11A1P05108 521 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 PDIA4P13667 645 aaKnown RBP13.5□□□□□ -0.25
CPSF4-208ENST00000452047 GARTP22102 1010 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 EPHA5P54756 1037 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 GPC5P78333 572 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 GPR17Q13304 367 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 PKP1Q13835 747 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 MYBPC2Q14324 1141 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 BRSK2Q8IWQ3 736 aa13.5□□□□□ -0.25
CPSF4-208ENST00000452047 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms