RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 GOLGA2P5Q9HBQ8 144 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 ZNHIT6Q9NWK9 470 aaKnown RBP20.68■□□□□ 0.9
RPS28-202ENST00000449223 GDAP2Q9NXN4 497 aa20.68■□□□□ 0.9
RPS28-202ENST00000449223 FOXN3O00409 490 aaPredicted RBP20.67■□□□□ 0.9
RPS28-202ENST00000449223 PPEF2O14830 753 aa20.67■□□□□ 0.9
RPS28-202ENST00000449223 UPP1Q16831 310 aa20.67■□□□□ 0.9
RPS28-202ENST00000449223 ARHGAP44Q17R89 818 aa20.67■□□□□ 0.9
RPS28-202ENST00000449223 LIMS2Q7Z4I7 341 aa20.67■□□□□ 0.9
RPS28-202ENST00000449223 C7orf61Q8IZ16 206 aa20.67■□□□□ 0.9
RPS28-202ENST00000449223 ARID3AQ99856 593 aa20.67■□□□□ 0.9
RPS28-202ENST00000449223 CYP3A43Q9HB55 503 aa20.67■□□□□ 0.9
RPS28-202ENST00000449223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.67■□□□□ 0.91e-18■■■■■ 447.2
RPS28-202ENST00000449223 LRFN2Q9ULH4 789 aa20.67■□□□□ 0.9
RPS28-202ENST00000449223 BZW2Q9Y6E2 419 aaKnown RBP20.67■□□□□ 0.9
RPS28-202ENST00000449223 POMCP01189 267 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 CCDC172P0C7W6 258 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 FERP16591 822 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 AARSP49588 968 aaKnown RBP eCLIP20.66■□□□□ 0.9
RPS28-202ENST00000449223 TAF6P49848 677 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 FPGSQ05932 587 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 CYP26C1Q6V0L0 522 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.66■□□□□ 0.9
RPS28-202ENST00000449223 C16orf59Q7L2K0 433 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 BADQ92934 168 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 TOP1MTQ969P6 601 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 ELMO3Q96BJ8 720 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 MRPL9Q9BYD2 267 aaKnown RBP20.66■□□□□ 0.9
RPS28-202ENST00000449223 TBC1D13Q9NVG8 400 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 PTPRSQ13332 1948 aa20.66■□□□□ 0.9
RPS28-202ENST00000449223 SSU72P8A0A1W2PR75 194 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 ARHGAP6O43182 974 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 EVI5O60447 810 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 SERPING1P05155 500 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 SKILP12757 684 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 KCNJ6P48051 423 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 LILRA4P59901 499 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 WDR5P61964 334 aaKnown RBP20.65■□□□□ 0.9
RPS28-202ENST00000449223 YWHAEP62258 255 aaKnown RBP20.65■□□□□ 0.9
RPS28-202ENST00000449223 MAPK8IP2Q13387 824 aaPredicted RBP20.65■□□□□ 0.9
RPS28-202ENST00000449223 SV2CQ496J9 727 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 ABI1Q8IZP0 508 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 TTC39CQ8N584 583 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 ARHGAP20Q9P2F6 1191 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 INPP5FQ9Y2H2 1132 aa20.65■□□□□ 0.9
RPS28-202ENST00000449223 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.65■□□□□ 0.92e-16■■□□□ 11.8
RPS28-202ENST00000449223 KPNA7A9QM74 516 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 TMEM189-UBE2V1I3L0A0 370 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 PODXLO00592 558 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 FAM163BP0C2L3 166 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 CLCNKBP51801 687 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 ZNF132P52740 706 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 INCA1Q0VD86 236 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 ASIC2Q16515 512 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 COLGALT2Q8IYK4 626 aa20.64■□□□□ 0.9
RPS28-202ENST00000449223 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.9
RPS28-202ENST00000449223 RC3H2Q9HBD1 1191 aaKnown RBP20.64■□□□□ 0.9
RPS28-202ENST00000449223 DGKIO75912 1065 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 AMHP03971 560 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 PNMA6AP0CW24 399 aaPredicted RBP20.63■□□□□ 0.89
RPS28-202ENST00000449223 ANXA13P27216 316 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 TNNC1P63316 161 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 PSRC1Q6PGN9 363 aaPredicted RBP20.63■□□□□ 0.89
RPS28-202ENST00000449223 DPH6Q7L8W6 267 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 CCDC170Q8IYT3 715 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 CHP1Q99653 195 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 CISHQ9NSE2 258 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 NXF1Q9UBU9 619 aaKnown RBP20.63■□□□□ 0.89
RPS28-202ENST00000449223 SPTLC1O15269 473 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 TACC1O75410 805 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 GFPT2O94808 682 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 DDHD2O94830 711 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 ACRP10323 421 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 IBSPP21815 317 aaPredicted RBP20.63■□□□□ 0.89
RPS28-202ENST00000449223 CLCN1P35523 988 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 ASTE1Q2TB18 679 aaPredicted RBP20.63■□□□□ 0.89
RPS28-202ENST00000449223 ZNF689Q96CS4 500 aaPredicted RBP20.63■□□□□ 0.89
RPS28-202ENST00000449223 SYT11Q9BT88 431 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 POLIQ9UNA4 740 aa20.63■□□□□ 0.89
RPS28-202ENST00000449223 CASTOR2A6NHX0 329 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 B4GALT3O60512 393 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 KLHL30Q0D2K2 578 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 TMEM240Q5SV17 173 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 DCLRE1AQ6PJP8 1040 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 ZNF280BQ86YH2 543 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 LRRC43Q8N309 656 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 C3orf58Q8NDZ4 430 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 PAAF1Q9BRP4 392 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 SDCBP2Q9H190 292 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 SMYD3Q9H7B4 428 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 SNX9Q9Y5X1 595 aa20.62■□□□□ 0.89
RPS28-202ENST00000449223 SOWAHDA6NJG2 315 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 CILPO75339 1184 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 FGBP02675 491 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 BPIFB4P59827 614 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 CD300LGQ6UXG3 332 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 ZNF365Q70YC5 407 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 TOP6BLQ8N6T0 577 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 EPS8L1Q8TE68 723 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 HAUS4Q9H6D7 363 aa20.61■□□□□ 0.89
RPS28-202ENST00000449223 NHEJ1Q9H9Q4 299 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms