RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ACAD9Q9H845 621 aa5.91□□□□□ -1.46
SDCBP-205ENST00000447267 COPRSQ9NQ92 184 aa5.91□□□□□ -1.46
SDCBP-205ENST00000447267 RNF146Q9NTX7 359 aa5.91□□□□□ -1.46
SDCBP-205ENST00000447267 FAM53CQ9NYF3 392 aa5.91□□□□□ -1.46
SDCBP-205ENST00000447267 LRP2BPQ9P2M1 347 aa5.91□□□□□ -1.46
SDCBP-205ENST00000447267 REV1Q9UBZ9 1251 aa5.91□□□□□ -1.46
SDCBP-205ENST00000447267 PUF60Q9UHX1 559 aaKnown RBP5.91□□□□□ -1.46
SDCBP-205ENST00000447267 DDX41Q9UJV9 622 aaKnown RBP5.91□□□□□ -1.46
SDCBP-205ENST00000447267 SUPT16HQ9Y5B9 1047 aaKnown RBP5.91□□□□□ -1.46
SDCBP-205ENST00000447267 POLQO75417 2590 aa5.91□□□□□ -1.46
SDCBP-205ENST00000447267 LNP1A1A4G5 178 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 TBKBP1A7MCY6 615 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 ANHXE9PGG2 379 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 H0Y626 953 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 HAS3O00219 553 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 HTR3BO95264 441 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 TRIM16O95361 564 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 CHRNA1P02708 482 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 HPXP02790 462 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 RLBP1P12271 317 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 CFPP27918 469 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 TPP2P29144 1249 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-205ENST00000447267 CNR2P34972 360 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 EIF2S3P41091 472 aaKnown RBP5.9□□□□□ -1.46
SDCBP-205ENST00000447267 SNAP25P60880 206 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 WTAPQ15007 396 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 LY6KQ17RY6 165 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 PARM1Q6UWI2 310 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 NSMFQ6X4W1 530 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 LCNL1Q6ZST4 164 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 TMEM179Q6ZVK1 233 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 SYDE1Q6ZW31 735 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-205ENST00000447267 SLFN12Q8IYM2 578 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 PRPF38AQ8NAV1 312 aaKnown RBP5.9□□□□□ -1.46
SDCBP-205ENST00000447267 SLC22A17Q8WUG5 538 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 ATP6V0A1Q93050 837 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 DYNLL2Q96FJ2 89 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 TMEM74Q96NL1 305 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 DIRC2Q96SL1 478 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 SLC32A1Q9H598 525 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 SLC38A10Q9HBR0 1119 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 TMEM9BQ9NQ34 198 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 C2orf42Q9NWW7 574 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 TMEM59LQ9UK28 342 aa5.9□□□□□ -1.46
SDCBP-205ENST00000447267 ACACAQ13085 2346 aa5.9□□□□□ -1.47
SDCBP-205ENST00000447267 RALGAPA1Q6GYQ0 2036 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 PATE3B3GLJ2 98 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 NKRFO15226 690 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDCBP-205ENST00000447267 TSPAN15O95858 294 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 EFEMP2O95967 443 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 ALAS1P13196 640 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 LAMP2P13473 410 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 CR2P20023 1033 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 RDXP35241 583 aaKnown RBP5.89□□□□□ -1.47
SDCBP-205ENST00000447267 RFX5P48382 616 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-205ENST00000447267 PXNP49023 591 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-205ENST00000447267 CCR3P51677 355 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 GABPAQ06546 454 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 SERINC3Q13530 473 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 SMC1AQ14683 1233 aaKnown RBP5.89□□□□□ -1.47
SDCBP-205ENST00000447267 LPIN1Q14693 890 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 PPP2R5DQ14738 602 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 RABL6Q3YEC7 729 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-205ENST00000447267 FAM102BQ5T8I3 360 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 MPZL3Q6UWV2 235 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 RASGRP2Q7LDG7 609 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 TSPYL5Q86VY4 417 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-205ENST00000447267 MIGA1Q8NAN2 632 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 SPATA5Q8NB90 893 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 BHLHE22Q8NFJ8 381 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-205ENST00000447267 FGF14Q92915 247 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 LOXL4Q96JB6 756 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 NELL2Q99435 816 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 RSRP1Q9BUV0 290 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 PCGF6Q9BYE7 350 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 FZD8Q9H461 694 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 CWH43Q9H720 699 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 SH2D4AQ9H788 454 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 LMAN1LQ9HAT1 526 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 CYP39A1Q9NYL5 469 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 LZTS1Q9Y250 596 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 FOCADQ5VW36 1801 aa5.89□□□□□ -1.47
SDCBP-205ENST00000447267 C17orf102A2RUQ5 167 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 MINDY4BA8MYZ0 360 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 K7ESF4 209 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 SORBS3O60504 671 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 CAVIN2O95810 425 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 ZGLP1P0C6A0 271 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 CYP2D6P10635 497 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 C6P13671 934 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 ADSSP30520 456 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 ALDH5A1P51649 535 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-205ENST00000447267 CREB5Q02930 508 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 EGR3Q06889 387 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 ARHGAP1Q07960 439 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 DGKDQ16760 1214 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 FBLN7Q53RD9 439 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 ZNF852Q6ZMS4 543 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 GPR155Q7Z3F1 870 aa5.88□□□□□ -1.47
SDCBP-205ENST00000447267 CACNA2D4Q7Z3S7 1137 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms