RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 CASP5P51878 434 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 LILRA4P59901 499 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 ADCY1Q08828 1119 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 STK38Q15208 465 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 FOXD4L5Q5VV16 416 aaPredicted RBP22.52■■□□□ 1.2
SDC1-205ENST00000447124 C9orf57Q5W0N0 161 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 DSTYKQ6XUX3 929 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 PDILTQ8N807 584 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 ZSWIM2Q8NEG5 633 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 BEST2Q8NFU1 509 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 FOXD4L4Q8WXT5 416 aaPredicted RBP22.52■■□□□ 1.2
SDC1-205ENST00000447124 MCRS1Q96EZ8 462 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 ASB7Q9H672 318 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 SLC2A4RGQ9NR83 387 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 SEL1LQ9UBV2 794 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 CA14Q9ULX7 337 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 INSL5Q9Y5Q6 135 aa22.52■■□□□ 1.2
SDC1-205ENST00000447124 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.52■■□□□ 1.2
SDC1-205ENST00000447124 ANO9A1A5B4 782 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 FRMD3A2A2Y4 597 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 LRG1P02750 347 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 GAP43P17677 238 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 STAT6P42226 847 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 YWHAHQ04917 246 aaPredicted RBP22.51■■□□□ 1.19
SDC1-205ENST00000447124 PRSS36Q5K4E3 855 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 HVCN1Q96D96 273 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 TCEAL4Q96EI5 215 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 SENP8Q96LD8 212 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 CEP72Q9P209 647 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 DERAQ9Y315 318 aa22.51■■□□□ 1.19
SDC1-205ENST00000447124 SPTLC2O15270 562 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 IDEP14735 1019 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 CCR2P41597 374 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 WNT7BP56706 349 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 TMEM132DQ14C87 1099 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 L1TD1Q5T7N2 865 aaKnown RBP22.5■■□□□ 1.19
SDC1-205ENST00000447124 HS6ST3Q8IZP7 471 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 POMGNT1Q8WZA1 660 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 ACCSQ96QU6 501 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 CORO1BQ9BR76 489 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 PLA2G2FQ9BZM2 168 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 CRISPLD1Q9H336 500 aa22.5■■□□□ 1.19
SDC1-205ENST00000447124 PPP6R2O75170 966 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 CEBPBP17676 345 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 TYMPP19971 482 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 POU5F1Q01860 360 aaKnown RBP22.49■■□□□ 1.19
SDC1-205ENST00000447124 POSTNQ15063 836 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 E2F4Q16254 413 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 EFCAB13Q8IY85 973 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 ATOH1Q92858 354 aaPredicted RBP22.49■■□□□ 1.19
SDC1-205ENST00000447124 BORCS6Q96GS4 357 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 ZNF396Q96N95 335 aaPredicted RBP22.49■■□□□ 1.19
SDC1-205ENST00000447124 TMEM209Q96SK2 561 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 KXD1Q9BQD3 176 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 OLFML3Q9NRN5 406 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 PANK4Q9NVE7 773 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 MAFFQ9ULX9 164 aa22.49■■□□□ 1.19
SDC1-205ENST00000447124 MOSPD3O75425 235 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 GCNT3O95395 438 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 CPB1P15086 417 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 TWF1Q12792 350 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 SCARA3Q6AZY7 606 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 OVOS1Q6IE37 1185 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 MTSS1LQ765P7 747 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 USP37Q86T82 979 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 PGLYRP2Q96PD5 576 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 RTP3Q9BQQ7 232 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 TBC1D17Q9HA65 648 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 DPP3Q9NY33 737 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 C2CD2Q9Y426 696 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 PCDHB13Q9Y5F0 798 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 SCN1AP35498 2009 aa22.48■■□□□ 1.19
SDC1-205ENST00000447124 OR6C75A6NL08 312 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 STK25O00506 426 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 PRPF6O94906 941 aaKnown RBP22.47■■□□□ 1.19
SDC1-205ENST00000447124 GPR17Q13304 367 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 FOXD4L6Q3SYB3 417 aaPredicted RBP22.47■■□□□ 1.19
SDC1-205ENST00000447124 TANGO2Q6ICL3 276 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 SHC4Q6S5L8 630 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 FOXD4L3Q6VB84 417 aaPredicted RBP22.47■■□□□ 1.19
SDC1-205ENST00000447124 GLIS3Q8NEA6 775 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 SAAL1Q96ER3 474 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 ZNF512Q96ME7 567 aaPredicted RBP22.47■■□□□ 1.19
SDC1-205ENST00000447124 FAM213AQ9BRX8 229 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 OXCT2Q9BYC2 517 aaPredicted RBP22.47■■□□□ 1.19
SDC1-205ENST00000447124 IRF2BPLQ9H1B7 796 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 ARHGEF3Q9NR81 526 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 KBTBD4Q9NVX7 518 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 GDE1Q9NZC3 331 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 EXOC7Q9UPT5 735 aa22.47■■□□□ 1.19
SDC1-205ENST00000447124 ZFHX2Q9C0A1 2572 aaPredicted RBP22.46■■□□□ 1.19
SDC1-205ENST00000447124 ANK1P16157 1881 aa22.46■■□□□ 1.19
SDC1-205ENST00000447124 YEATS4O95619 227 aa22.46■■□□□ 1.19
SDC1-205ENST00000447124 DUSP4Q13115 394 aa22.46■■□□□ 1.19
SDC1-205ENST00000447124 MYBPC2Q14324 1141 aa22.46■■□□□ 1.19
SDC1-205ENST00000447124 CENPPQ6IPU0 288 aa22.46■■□□□ 1.19
SDC1-205ENST00000447124 PHLDB3Q6NSJ2 640 aa22.46■■□□□ 1.19
SDC1-205ENST00000447124 CCDC105Q8IYK2 499 aa22.46■■□□□ 1.19
SDC1-205ENST00000447124 DTWD2Q8NBA8 298 aa22.46■■□□□ 1.19
SDC1-205ENST00000447124 ATAD1Q8NBU5 361 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms