RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ADCY1Q08828 1119 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 E2F4Q16254 413 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 TCEAL8Q8IYN2 117 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 SAAL1Q96ER3 474 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 OXCT2Q9BYC2 517 aaPredicted RBP21.75■■□□□ 1.07
LRCH3-208ENST00000443727 KBTBD4Q9NVX7 518 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 DPP3Q9NY33 737 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 DNMT3BQ9UBC3 853 aaKnown RBP21.75■■□□□ 1.07
LRCH3-208ENST00000443727 MRPS23Q9Y3D9 190 aaKnown RBP21.75■■□□□ 1.07
LRCH3-208ENST00000443727 ARHGEF37A1IGU5 675 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 POLR2DO15514 142 aaKnown RBP21.74■■□□□ 1.07
LRCH3-208ENST00000443727 PRPF6O94906 941 aaKnown RBP21.74■■□□□ 1.07
LRCH3-208ENST00000443727 OAZ2O95190 189 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 AVPR2P30518 371 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 VCPP55072 806 aaKnown RBP21.74■■□□□ 1.07
LRCH3-208ENST00000443727 DNM1Q05193 864 aaKnown RBP21.74■■□□□ 1.07
LRCH3-208ENST00000443727 OVOS1Q6IE37 1185 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 ELMOD1Q8N336 334 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 SLC44A3Q8N4M1 653 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 ITFG1Q8TB96 612 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 FGF13Q92913 245 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 SENP8Q96LD8 212 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 PRRX2Q99811 253 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 FGFBP2Q9BYJ0 223 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 TRIM9Q9C026 710 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 AFF4Q9UHB7 1163 aaKnown RBP21.74■■□□□ 1.07
LRCH3-208ENST00000443727 KCNH3Q9ULD8 1083 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 MAFFQ9ULX9 164 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 PCDHA7Q9UN72 937 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 INSL5Q9Y5Q6 135 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 MYH15Q9Y2K3 1946 aa21.74■■□□□ 1.07
LRCH3-208ENST00000443727 NARSO43776 548 aaKnown RBP21.73■■□□□ 1.07
LRCH3-208ENST00000443727 SEC24AO95486 1093 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 LDHAP00338 332 aaKnown RBP21.73■■□□□ 1.07
LRCH3-208ENST00000443727 PTPN2P17706 415 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 GARTP22102 1010 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 HTR4Q13639 388 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 IER5LQ5T953 404 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 CRELD2Q6UXH1 353 aaPredicted RBP21.73■■□□□ 1.07
LRCH3-208ENST00000443727 ST13P5Q8NFI4 369 aaPredicted RBP21.73■■□□□ 1.07
LRCH3-208ENST00000443727 ING5Q8WYH8 240 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 CORO1BQ9BR76 489 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 MAGEF1Q9HAY2 307 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 NUMBLQ9Y6R0 609 aa21.73■■□□□ 1.07
LRCH3-208ENST00000443727 ZNF318Q5VUA4 2279 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 GOLGA8IPA6NC78 632 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 OR6C75A6NL08 312 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 GOLGA8JA6NMD2 632 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 ANHXE9PGG2 379 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 PIRO00625 290 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 RHOP08100 348 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 CFHP08603 1231 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 TYMPP19971 482 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 TFAMQ00059 246 aaKnown RBP21.72■■□□□ 1.07
LRCH3-208ENST00000443727 IQCEQ6IPM2 695 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 ARMCX5Q6P1M9 558 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 RNF19BQ6ZMZ0 732 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 MTSS1LQ765P7 747 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 NT5DC4Q86YG4 428 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 SIX5Q8N196 739 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 FLCNQ8NFG4 579 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 HPS3Q969F9 1004 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 PCIF1Q9H4Z3 704 aa21.72■■□□□ 1.07
LRCH3-208ENST00000443727 RBAKQ9NYW8 714 aaPredicted RBP21.72■■□□□ 1.07
LRCH3-208ENST00000443727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.71■■□□□ 1.07
LRCH3-208ENST00000443727 ANO9A1A5B4 782 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 SPTLC1O15269 473 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 OR4Q2P0C623 313 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 SRFP11831 508 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 RFX1P22670 979 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 TAF6P49848 677 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 RESP18Q5W5W9 173 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 METTL23Q86XA0 190 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 CACTINQ8WUQ7 758 aaKnown RBP21.71■■□□□ 1.07
LRCH3-208ENST00000443727 ZNF512Q96ME7 567 aaPredicted RBP21.71■■□□□ 1.07
LRCH3-208ENST00000443727 PGLYRP2Q96PD5 576 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 C7orf25Q9BPX7 421 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 PYM1Q9BRP8 204 aaKnown RBP21.71■■□□□ 1.07
LRCH3-208ENST00000443727 CBWD1Q9BRT8 395 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 DSEQ9UL01 958 aa21.71■■□□□ 1.07
LRCH3-208ENST00000443727 STK25O00506 426 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 CYB561D2O14569 222 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 EXTL3O43909 919 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 TWF1Q12792 350 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 FAM26FQ5R3K3 315 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 CYP4A22Q5TCH4 519 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 ASTLQ6HA08 431 aaPredicted RBP21.7■■□□□ 1.06
LRCH3-208ENST00000443727 PARM1Q6UWI2 310 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 BRSK2Q8IWQ3 736 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 NPAS3Q8IXF0 933 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 EFCAB13Q8IY85 973 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 CEP57L1Q8IYX8 460 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 ZSWIM2Q8NEG5 633 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 RCOR1Q9UKL0 485 aa21.7■■□□□ 1.06
LRCH3-208ENST00000443727 DOCK8Q8NF50 2099 aa21.69■■□□□ 1.06
LRCH3-208ENST00000443727 AFMP43652 599 aa21.69■■□□□ 1.06
LRCH3-208ENST00000443727 PTPN5P54829 565 aa21.69■■□□□ 1.06
LRCH3-208ENST00000443727 GPR17Q13304 367 aa21.69■■□□□ 1.06
LRCH3-208ENST00000443727 MYBPC2Q14324 1141 aa21.69■■□□□ 1.06
LRCH3-208ENST00000443727 SV2CQ496J9 727 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms