RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 FBXO4Q9UKT5 387 aa12.65□□□□□ -0.38
UBE2D4-204ENST00000440899 MRPS17Q9Y2R5 130 aaKnown RBP12.65□□□□□ -0.38
UBE2D4-204ENST00000440899 MTF2Q9Y483 593 aaPredicted RBP12.65□□□□□ -0.38
UBE2D4-204ENST00000440899 DCHS1Q96JQ0 3298 aa12.65□□□□□ -0.38
UBE2D4-204ENST00000440899 DMXL1Q9Y485 3027 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 MYH15Q9Y2K3 1946 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 A0A0B4J269 797 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 OR6C75A6NL08 312 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 FAM189A1O60320 539 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 KRT18P05783 430 aaKnown RBP12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 ADRB2P07550 413 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 PAX3P23760 479 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 FCARP24071 287 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 TNFSF9P41273 254 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 CCR2P41597 374 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 EPHA5P54756 1037 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 TWF1Q12792 350 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 MCM6Q14566 821 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 ZNF528Q3MIS6 628 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 FAM78AQ5JUQ0 283 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 DSTYKQ6XUX3 929 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 RNF19BQ6ZMZ0 732 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 TPRG1Q6ZUI0 275 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 CD302Q8IX05 232 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 MAML2Q8IZL2 1156 aaPredicted RBP12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 RASSF8Q8NHQ8 419 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 DNASE1L2Q92874 299 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 SMARCD2Q92925 531 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 ASB16Q96NS5 453 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 TRMT61BQ9BVS5 477 aaKnown RBP12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 BRD9Q9H8M2 597 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 ASAH2Q9NR71 780 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 BLOC1S4Q9NUP1 217 aa12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 SPATA6Q9NWH7 488 aaPredicted RBP12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 TIMM13Q9Y5L4 95 aaPredicted RBP12.64□□□□□ -0.39
UBE2D4-204ENST00000440899 K7ENM7 598 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 TRAK2O60296 914 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 TBCAO75347 108 aaKnown RBP12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 PLCG1P19174 1290 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 TYMPP19971 482 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 TARSP26639 723 aaKnown RBP12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 RPS9P46781 194 aaKnown RBP12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 GPR17Q13304 367 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 KARSQ15046 597 aaKnown RBP12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 SPATA1Q5VX52 437 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 HS6ST3Q8IZP7 471 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 TMEM130Q8N3G9 435 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 LRRC15Q8TF66 581 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 RAD54LQ92698 747 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 IRF7Q92985 503 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 ZSWIM3Q96MP5 696 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 MSTO1Q9BUK6 570 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 GPR88Q9GZN0 384 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 TRPV4Q9HBA0 871 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 TRPV5Q9NQA5 729 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 HEBP1Q9NRV9 189 aa12.63□□□□□ -0.39
UBE2D4-204ENST00000440899 F5P12259 2224 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 OTOGLQ3ZCN5 2332 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 MYH11P35749 1972 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 MAN2B1O00754 1011 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 KINO60870 393 aaKnown RBP12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 MOSPD3O75425 235 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 MYL4P12829 197 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 PSMC3P17980 439 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 DDIT3P35638 169 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 ID4P47928 161 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 GUCY2FP51841 1108 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 EPHB3P54753 998 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 LILRA4P59901 499 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 GTF2BQ00403 316 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 CSTF1Q05048 431 aaKnown RBP12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 DUSP4Q13115 394 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 PLD1Q13393 1074 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 MYBPC2Q14324 1141 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 GRM2Q14416 872 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 SF3A1Q15459 793 aaKnown RBP12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 OVOS1Q6IE37 1185 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 JADE1Q6IE81 842 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 ARMCX5Q6P1M9 558 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 SLC39A4Q6P5W5 647 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 MAP4K3Q8IVH8 894 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 LARP4BQ92615 738 aaKnown RBP12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 RUBCNQ92622 972 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 SENP8Q96LD8 212 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 SLITRK6Q9H5Y7 841 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 CPSF3Q9UKF6 684 aaKnown RBP12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 DERAQ9Y315 318 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 YIPF1Q9Y548 306 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 ASB3Q9Y575 518 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 GPR179Q6PRD1 2367 aa12.62□□□□□ -0.39
UBE2D4-204ENST00000440899 NRG2O14511 850 aaPredicted RBP12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 PPEF2O14830 753 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 VNN2O95498 520 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 ODC1P11926 461 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 NMT1P30419 496 aaKnown RBP12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 GDI1P31150 447 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms