RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ZNF516Q92618 1163 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 SENP8Q96LD8 212 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 TMEM209Q96SK2 561 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 MTMR12Q9C0I1 747 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 SFXN1Q9H9B4 322 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 PRKAG3Q9UGI9 489 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 FBXL5Q9UKA1 691 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 CCDC195A0A1B0GUA6 201 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 GOLGA6L4A6NEF3 574 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 ZNF233A6NK53 670 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 TULP1O00294 542 aaPredicted RBP14.35□□□□□ -0.11
LINC00399-201ENST00000439008 XPOTO43592 962 aaKnown RBP14.35□□□□□ -0.11
LINC00399-201ENST00000439008 SEC24AO95486 1093 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 ITGB3P05106 788 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 OR4Q2P0C623 313 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 SRGAP2BP0DMP2 458 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 POLR2BP30876 1174 aaKnown RBP14.35□□□□□ -0.11
LINC00399-201ENST00000439008 CDR1P51861 262 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 ITIH3Q06033 890 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 CYP24A1Q07973 514 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 KCNB1Q14721 858 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 CMASQ8NFW8 434 aaPredicted RBP14.35□□□□□ -0.11
LINC00399-201ENST00000439008 SPATA20Q8TB22 786 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 RTP3Q9BQQ7 232 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 PHF7Q9BWX1 381 aaPredicted RBP14.35□□□□□ -0.11
LINC00399-201ENST00000439008 INTS13Q9NVM9 706 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 PCDHA5Q9Y5H7 936 aa14.35□□□□□ -0.11
LINC00399-201ENST00000439008 KIAA0391O15091 583 aaKnown RBP14.34□□□□□ -0.11
LINC00399-201ENST00000439008 N4BP1O75113 896 aaKnown RBP14.34□□□□□ -0.11
LINC00399-201ENST00000439008 ZMYND10O75800 440 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 ABLIM3O94929 683 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 OAZ2O95190 189 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 C1RP00736 705 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 CREMQ03060 361 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 CTXN3Q4LDR2 81 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 ZCWPW2Q504Y3 356 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 HS2ST1Q7LGA3 356 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 XXYLT1Q8NBI6 393 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 RPGRIP1Q96KN7 1286 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 MFSD14AQ96MC6 490 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 CRISPLD1Q9H336 500 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 PLEKHA4Q9H4M7 779 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 EPHX3Q9H6B9 360 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 FAM50BQ9Y247 325 aa14.34□□□□□ -0.11
LINC00399-201ENST00000439008 C2CD4DB7Z1M9 353 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 PDXKO00764 312 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 BMP6P22004 513 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 SSTR3P32745 418 aaPredicted RBP14.33□□□□□ -0.12
LINC00399-201ENST00000439008 ARPP19P56211 112 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 SNRPFP62306 86 aaKnown RBP14.33□□□□□ -0.12
LINC00399-201ENST00000439008 NTHL1P78549 312 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 PSMD6Q15008 389 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 C1orf220Q5T0J3 134 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 CES5AQ6NT32 575 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 PDXDC1Q6P996 788 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 DSTYKQ6XUX3 929 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 RNF19BQ6ZMZ0 732 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 NT5DC4Q86YG4 428 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 SLC9A9Q8IVB4 645 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 CSGALNACT2Q8N6G5 542 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 OR10T2Q8NGX3 314 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 HDAC7Q8WUI4 952 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 CCDC127Q96BQ5 260 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 TIGD1Q96MW7 591 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
LINC00399-201ENST00000439008 NRG2O14511 850 aaPredicted RBP14.32□□□□□ -0.12
LINC00399-201ENST00000439008 CYB561D2O14569 222 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 CCL16O15467 120 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 HCRTO43612 131 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 CST3P01034 146 aaPredicted RBP14.32□□□□□ -0.12
LINC00399-201ENST00000439008 NR3C1P04150 777 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 CYP11A1P05108 521 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 C8AP07357 584 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 DLATP10515 647 aaKnown RBP14.32□□□□□ -0.12
LINC00399-201ENST00000439008 TYMPP19971 482 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 PRCPP42785 496 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 MTHFRP42898 656 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 TAF6P49848 677 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 DLG4P78352 724 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 YWHAHQ04917 246 aaPredicted RBP14.32□□□□□ -0.12
LINC00399-201ENST00000439008 CCDC142Q17RM4 750 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 ATAT1Q5SQI0 421 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 WSCD1Q658N2 575 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 ISM2Q6H9L7 571 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 POTEHQ6S545 545 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 C15orf39Q6ZRI6 1047 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 RNF135Q8IUD6 432 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 GUF1Q8N442 669 aaKnown RBP14.32□□□□□ -0.12
LINC00399-201ENST00000439008 APPL2Q8NEU8 664 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 ZNF461Q8TAF7 563 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 SLC7A14Q8TBB6 771 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 TMEM174Q8WUU8 243 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 SMG7Q92540 1137 aaKnown RBP14.32□□□□□ -0.12
LINC00399-201ENST00000439008 ELMO3Q96BJ8 720 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 CGRRF1Q99675 332 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 PRKD2Q9BZL6 878 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 KIAA1586Q9HCI6 787 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 HCFC1R1Q9NWW0 138 aa14.32□□□□□ -0.12
LINC00399-201ENST00000439008 ZDHHC7Q9NXF8 308 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms