RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SCARA3Q6AZY7 606 aa19.56■□□□□ 0.72
HMGN1-206ENST00000431390 AGMOQ6ZNB7 445 aa19.56■□□□□ 0.72
HMGN1-206ENST00000431390 TOGARAM2Q6ZUX3 1019 aa19.56■□□□□ 0.72
HMGN1-206ENST00000431390 ECHDC2Q86YB7 292 aa19.56■□□□□ 0.72
HMGN1-206ENST00000431390 DEF6Q9H4E7 631 aa19.56■□□□□ 0.72
HMGN1-206ENST00000431390 PRDM6Q9NQX0 595 aa19.56■□□□□ 0.72
HMGN1-206ENST00000431390 TBX21Q9UL17 535 aa19.56■□□□□ 0.72
HMGN1-206ENST00000431390 GBF1Q92538 1859 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 EIF3CLB5ME19 914 aaKnown RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 C9IYK1 514 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 ZSCAN12O43309 604 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 CLSTN1O94985 981 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 PNMA6AP0CW24 399 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 ATF7P17544 494 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 ASTE1Q2TB18 679 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 ZNF667Q5HYK9 610 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 GLRA4Q5JXX5 417 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 SLC24A5Q71RS6 500 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 CCAR2Q8N163 923 aaKnown RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 SEPT8Q92599 483 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 ELMO3Q96BJ8 720 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 EIF3CQ99613 913 aaKnown RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 TSPYL2Q9H2G4 693 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-206ENST00000431390 HAUS4Q9H6D7 363 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 TUBGCP4Q9UGJ1 667 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 AGAP1Q9UPQ3 857 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 ADGRG1Q9Y653 693 aa19.55■□□□□ 0.72
HMGN1-206ENST00000431390 UMODL1Q5DID0 1318 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 PTGESO14684 152 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 LCA5LO95447 670 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 EOMESO95936 686 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 CXCL10P02778 98 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 CCDC175P0C221 793 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 GUCY2FP51841 1108 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 KIF11P52732 1056 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 FAM189BP81408 668 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 SCN5AQ14524 2016 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 ZNF598Q86UK7 904 aaKnown RBP19.54■□□□□ 0.72
HMGN1-206ENST00000431390 RTN4RL1Q86UN2 441 aaPredicted RBP19.54■□□□□ 0.72
HMGN1-206ENST00000431390 LRRC52Q8N7C0 313 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 PPP1R10Q96QC0 940 aaKnown RBP19.54■□□□□ 0.72
HMGN1-206ENST00000431390 RPS6KC1Q96S38 1066 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 SLC38A7Q9NVC3 462 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 PPP2R2CQ9Y2T4 447 aa19.54■□□□□ 0.72
HMGN1-206ENST00000431390 MEIS3P2A8K0S8 358 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 RBAK-RBAKDNI3L0D1 243 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 AKR1B10O60218 316 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 IPO7O95373 1038 aaKnown RBP19.53■□□□□ 0.72
HMGN1-206ENST00000431390 P4HA1P13674 534 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 ACO1P21399 889 aaKnown RBP19.53■□□□□ 0.72
HMGN1-206ENST00000431390 MLH1P40692 756 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 PTK2Q05397 1052 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 MYO1EQ12965 1108 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 GPIHBP1Q8IV16 184 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 UBR7Q8N806 425 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 GSTCDQ8NEC7 633 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 DBF4BQ8NFT6 615 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 LINC01599Q8WXQ3 324 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 LPPQ93052 612 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 C18orf25Q96B23 403 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-206ENST00000431390 HPDLQ96IR7 371 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 GAD1Q99259 594 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 ARID3AQ99856 593 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.53■□□□□ 0.724e-7■■■□□ 15.1
HMGN1-206ENST00000431390 WNT8AQ9H1J5 351 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 FAM124BQ9H5Z6 455 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-206ENST00000431390 RSAD1Q9HA92 442 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 SPTLC3Q9NUV7 552 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 CNTN6Q9UQ52 1028 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 TDRD15B5MCY1 1934 aaKnown RBP19.53■□□□□ 0.72
HMGN1-206ENST00000431390 ANO9A1A5B4 782 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 INPPL1O15357 1258 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 ASPAP45381 313 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 YWHAEP62258 255 aaKnown RBP19.53■□□□□ 0.72
HMGN1-206ENST00000431390 KRT83P78385 493 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 C9orf57Q5W0N0 161 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 ZNF571Q7Z3V5 609 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-206ENST00000431390 VPS36Q86VN1 386 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 C17orf53Q8N3J3 647 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-206ENST00000431390 ZFP42Q96MM3 310 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 DESI2Q9BSY9 194 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 BCO2Q9BYV7 579 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 ZNF576Q9H609 170 aa19.53■□□□□ 0.72
HMGN1-206ENST00000431390 MYO9BQ13459 2157 aa19.52■□□□□ 0.72
HMGN1-206ENST00000431390 SCN1AP35498 2009 aa19.52■□□□□ 0.72
HMGN1-206ENST00000431390 ARL5CA6NH57 179 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 PIRO00625 290 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 OFD1O75665 1012 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 TIMP1P01033 207 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 THP07101 528 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 LRPAP1P30533 357 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 RFC2P35250 354 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 CLCN1P35523 988 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 USP8P40818 1118 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 PNPLA4P41247 253 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 WDR72Q3MJ13 1102 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 ACRBPQ8NEB7 543 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 TIFAQ96CG3 184 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms