RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SGSM1Q2NKQ1 1148 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 ZNF699Q32M78 642 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 ZNF394Q53GI3 561 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 LRIG3Q6UXM1 1119 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 TMEM192Q8IY95 271 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 PLVAPQ9BX97 442 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 CISHQ9NSE2 258 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 ZDHHC18Q9NUE0 388 aa17.28■□□□□ 0.36
MBD4-203ENST00000429544 BTBD19C9JJ37 291 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 ASAP2O43150 1006 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 CSDE1O75534 798 aaKnown RBP17.27■□□□□ 0.36
MBD4-203ENST00000429544 IQCF3P0C7M6 154 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 CXCL8P10145 99 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 SLC1A1P43005 524 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 PTP4A2Q12974 167 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 MAMLD1Q13495 774 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 ZNF484Q5JVG2 852 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 MAMDC4Q6UXC1 1216 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 CCDC105Q8IYK2 499 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 AFG1LQ8WV93 481 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 ANKRD36BP1Q96IX9 119 aa17.27■□□□□ 0.36
MBD4-203ENST00000429544 CCL15-CCL14A0A0B4J2E2 113 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 H0YGN5 161 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 WEE2P0C1S8 567 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 KCNJ1P48048 391 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 PLTPP55058 493 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 C1QBPQ07021 282 aaKnown RBP17.27■□□□□ 0.35
MBD4-203ENST00000429544 CCL15Q16663 113 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 VCPIP1Q96JH7 1222 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 VTA1Q9NP79 307 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 TNFSF13BQ9Y275 285 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 PTPN22Q9Y2R2 807 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 NFS1Q9Y697 457 aa17.27■□□□□ 0.35
MBD4-203ENST00000429544 CETPP11597 493 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 ADCYAP1R1P41586 468 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 PHKA2P46019 1235 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 RPL21P46778 160 aaKnown RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 MAP1SQ66K74 1059 aaPredicted RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 PLEKHA7Q6IQ23 1121 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 DDX27Q96GQ7 796 aaKnown RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 RPF1Q9H9Y2 349 aaKnown RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 IFT122Q9HBG6 1241 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 MRPL47Q9HD33 250 aaKnown RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 SCINQ9Y6U3 715 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 O00370 1275 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 FSCN2O14926 492 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 B4GALT4O60513 344 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 SHOX2O60902 331 aaPredicted RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 ZDHHC24Q6UX98 284 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 LRRC31Q6UY01 552 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 TMEM130Q8N3G9 435 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 C12orf50Q8NA57 414 aaPredicted RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 C1orf131Q8NDD1 294 aaKnown RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 C1orf54Q8WWF1 131 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 MS4A4AQ96JQ5 239 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 ATP6V1G3Q96LB4 118 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 XYLT2Q9H1B5 865 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 CENPHQ9H3R5 247 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 TMBIM4Q9HC24 238 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 PRMT7Q9NVM4 692 aaPredicted RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.26■□□□□ 0.35
MBD4-203ENST00000429544 GRHL1Q9NZI5 618 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 POLIQ9UNA4 740 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 USTQ9Y2C2 406 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 ATP8A1Q9Y2Q0 1164 aa17.26■□□□□ 0.35
MBD4-203ENST00000429544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
MBD4-203ENST00000429544 A0A087WZ62 844 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.25■□□□□ 0.35
MBD4-203ENST00000429544 IQCA1LA6NCM1 817 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 GOLGA6L10A6NI86 522 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 GPR25O00155 361 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 PODXLO00592 558 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 KRT19P08727 400 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 GJC1P36383 396 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 FNTAP49354 379 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 TAS2R40P59535 323 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 SGO2Q562F6 1265 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 PPP1R2P3Q6NXS1 205 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 PPTC7Q8NI37 304 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 FBXO25Q8TCJ0 367 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 RUNDC3BQ96NL0 473 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 FDXACB1Q9BRP7 624 aaPredicted RBP17.25■□□□□ 0.35
MBD4-203ENST00000429544 HERPUD2Q9BSE4 406 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 CAPS2Q9BXY5 557 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 IVNS1ABPQ9Y6Y0 642 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 TLR3O15455 904 aaKnown RBP17.25■□□□□ 0.35
MBD4-203ENST00000429544 PPFIA2O75334 1257 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 ERLIN2O94905 339 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 VTNP04004 478 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 ASPAP45381 313 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 DRG2P55039 364 aaKnown RBP17.25■□□□□ 0.35
MBD4-203ENST00000429544 ZNF844Q08AG5 666 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 SNX1Q13596 522 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.25■□□□□ 0.35
MBD4-203ENST00000429544 BRI3BPQ8WY22 251 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 TXLNGYQ9BZA5 131 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 CALCOCO1Q9P1Z2 691 aa17.25■□□□□ 0.35
MBD4-203ENST00000429544 NXF1Q9UBU9 619 aaKnown RBP17.25■□□□□ 0.35
MBD4-203ENST00000429544 RPS6KA5O75582 802 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms