RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ARMCX3Q9UH62 379 aaPredicted RBP24.06■■□□□ 1.44
PTPN18-205ENST00000428843 PCDHB8Q9UN66 801 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 STXBP5LQ9Y2K9 1186 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 R3HCC1Q9Y3T6 440 aaKnown RBP24.06■■□□□ 1.44
PTPN18-205ENST00000428843 IRAK3Q9Y616 596 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 M0QZQ0 153 aa24.05■■□□□ 1.44
PTPN18-205ENST00000428843 PHACTR2O75167 634 aa24.05■■□□□ 1.44
PTPN18-205ENST00000428843 PAX3P23760 479 aa24.05■■□□□ 1.44
PTPN18-205ENST00000428843 BIRC3Q13489 604 aa24.05■■□□□ 1.44
PTPN18-205ENST00000428843 CCDC85BQ15834 202 aaPredicted RBP24.05■■□□□ 1.44
PTPN18-205ENST00000428843 TPD52L1Q16890 204 aaPredicted RBP24.05■■□□□ 1.44
PTPN18-205ENST00000428843 SV2CQ496J9 727 aa24.05■■□□□ 1.44
PTPN18-205ENST00000428843 SV2AQ7L0J3 742 aa24.05■■□□□ 1.44
PTPN18-205ENST00000428843 SENP8Q96LD8 212 aa24.05■■□□□ 1.44
PTPN18-205ENST00000428843 SSX2IPQ9Y2D8 614 aa24.05■■□□□ 1.44
PTPN18-205ENST00000428843 KPNA7A9QM74 516 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 SYN3O14994 580 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 GNA14O95837 355 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 GCLMP48507 274 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 ZACNQ401N2 412 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 DCAF17Q5H9S7 520 aaPredicted RBP24.04■■□□□ 1.44
PTPN18-205ENST00000428843 TCERG1LQ5VWI1 586 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 PRSS55Q6UWB4 352 aaPredicted RBP24.04■■□□□ 1.44
PTPN18-205ENST00000428843 RBM23Q86U06 439 aaKnown RBP24.04■■□□□ 1.44
PTPN18-205ENST00000428843 PIK3R5Q8WYR1 880 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 PPP2R3CQ969Q6 453 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 DNAJC25Q9H1X3 360 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 MMRN2Q9H8L6 949 aa24.04■■□□□ 1.44
PTPN18-205ENST00000428843 SYCE3A1L190 88 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 PER2O15055 1255 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 VNN1O95497 513 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 GTF2H1P32780 548 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 NRIP1P48552 1158 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 HYAL1Q12794 435 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 TRPC3Q13507 836 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 C15orf39Q6ZRI6 1047 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 GPR65Q8IYL9 337 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 LNX1Q8TBB1 728 aaPredicted RBP24.03■■□□□ 1.44
PTPN18-205ENST00000428843 PPM1EQ8WY54 764 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 HPDLQ96IR7 371 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 TLE6Q9H808 572 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 TMEM8AQ9HCN3 771 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 TSC2P49815 1807 aa24.03■■□□□ 1.44
PTPN18-205ENST00000428843 CYB561D2O14569 222 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 STX10O60499 249 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 CNPP09543 421 aaKnown RBP24.02■■□□□ 1.44
PTPN18-205ENST00000428843 CCDC192P0DO97 292 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 GTF2F1P35269 517 aaKnown RBP eCLIP24.02■■□□□ 1.44
PTPN18-205ENST00000428843 MARSP56192 900 aaKnown RBP24.02■■□□□ 1.44
PTPN18-205ENST00000428843 MYL6P60660 151 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 MYO1EQ12965 1108 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 VARS2Q5ST30 1063 aaKnown RBP24.02■■□□□ 1.44
PTPN18-205ENST00000428843 APPL2Q8NEU8 664 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 MAFAQ8NHW3 353 aaPredicted RBP24.02■■□□□ 1.44
PTPN18-205ENST00000428843 ENOX1Q8TC92 643 aaKnown RBP24.02■■□□□ 1.44
PTPN18-205ENST00000428843 SLC35C1Q96A29 364 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 KLHL5Q96PQ7 755 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 FUCA2Q9BTY2 467 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 EMILIN2Q9BXX0 1053 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 RXFP1Q9HBX9 757 aa24.02■■□□□ 1.44
PTPN18-205ENST00000428843 TIMM13Q9Y5L4 95 aaPredicted RBP24.02■■□□□ 1.44
PTPN18-205ENST00000428843 ODC1P11926 461 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 RPL17P18621 184 aaKnown RBP24.01■■□□□ 1.43
PTPN18-205ENST00000428843 NCOA4Q13772 614 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 PSMD5Q16401 504 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 DUSP6Q16828 381 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 PDXDC1Q6P996 788 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 ANKS3Q6ZW76 656 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 IRF2BP1Q8IU81 584 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 CNOT6LQ96LI5 555 aaKnown RBP24.01■■□□□ 1.43
PTPN18-205ENST00000428843 THAP9Q9H5L6 903 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 IGFLR1Q9H665 355 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.01■■□□□ 1.43
PTPN18-205ENST00000428843 FNIP2Q9P278 1114 aa24.01■■□□□ 1.43
PTPN18-205ENST00000428843 TEX28O15482 410 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 CLASP2O75122 1294 aaKnown RBP24■■□□□ 1.43
PTPN18-205ENST00000428843 HLA-DRAP01903 254 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 TYMPP19971 482 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 ATICP31939 592 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 PIK3CAP42336 1068 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 MXI1P50539 228 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 CREMQ03060 361 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 MRPL58Q14197 206 aaKnown RBP24■■□□□ 1.43
PTPN18-205ENST00000428843 ZSCAN23Q3MJ62 389 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 ANO6Q4KMQ2 910 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 KRT39Q6A163 491 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 TRIM59Q8IWR1 403 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 CDCA3Q99618 268 aaPredicted RBP24■■□□□ 1.43
PTPN18-205ENST00000428843 XYLT2Q9H1B5 865 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 GDAP2Q9NXN4 497 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 MTRRQ9UBK8 725 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 SNX9Q9Y5X1 595 aa24■■□□□ 1.43
PTPN18-205ENST00000428843 ARHGEF37A1IGU5 675 aa23.99■■□□□ 1.43
PTPN18-205ENST00000428843 STAU1O95793 577 aaKnown RBP23.99■■□□□ 1.43
PTPN18-205ENST00000428843 CYP11A1P05108 521 aa23.99■■□□□ 1.43
PTPN18-205ENST00000428843 KLRC2P26717 231 aa23.99■■□□□ 1.43
PTPN18-205ENST00000428843 YWHAHQ04917 246 aaPredicted RBP23.99■■□□□ 1.43
PTPN18-205ENST00000428843 CBWD6Q4V339 395 aa23.99■■□□□ 1.43
PTPN18-205ENST00000428843 CBWD3Q5JTY5 395 aa23.99■■□□□ 1.43
PTPN18-205ENST00000428843 CBWD5Q5RIA9 395 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms