RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ANKS4BQ8N8V4 417 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 HDAC7Q8WUI4 952 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 SCFD1Q8WVM8 642 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 EPAS1Q99814 870 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 GORASP1Q9BQQ3 440 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 INO80BQ9C086 356 aaPredicted RBP12.19□□□□□ -0.46
CECR3-201ENST00000428828 MINDY3Q9H8M7 445 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 IFT122Q9HBG6 1241 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 LMCD1Q9NZU5 365 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 TRIM10Q9UDY6 481 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 CAPN11Q9UMQ6 739 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 HYOU1Q9Y4L1 999 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 CDY2AQ9Y6F7 541 aa12.19□□□□□ -0.46
CECR3-201ENST00000428828 PPP1R3GB7ZBB8 358 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 N4BP3O15049 544 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 GPR32O75388 356 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 MAPTP10636 758 aaKnown RBP12.18□□□□□ -0.46
CECR3-201ENST00000428828 IBSPP21815 317 aaPredicted RBP12.18□□□□□ -0.46
CECR3-201ENST00000428828 DRD4P21917 467 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 PAFAH1B1P43034 410 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 CUL3Q13618 768 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 KRT31Q15323 416 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 C8orf74Q6P047 294 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 STXBP4Q6ZWJ1 553 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 CCDC197Q8NCU1 140 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 ADAMTS10Q9H324 1103 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 PPANQ9NQ55 473 aaKnown RBP12.18□□□□□ -0.46
CECR3-201ENST00000428828 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 ARHGAP28Q9P2N2 729 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
CECR3-201ENST00000428828 LRRD1A4D1F6 860 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 TRIM49BA6NDI0 452 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 K7ERI5 159 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 ZSCAN9O15535 394 aaPredicted RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 TACC1O75410 805 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 CD4P01730 458 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 EDN1P05305 212 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 PRKCBP05771 671 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 MYZAPP0CAP1 466 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 COPB1P53618 953 aaKnown RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 STRN3Q13033 797 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 ZNF618Q5T7W0 954 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 HHATQ5VTY9 493 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 TAS1R3Q7RTX0 852 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 ZNF410Q86VK4 478 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 SYCP3Q8IZU3 236 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 ADSSL1Q8N142 457 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 NME8Q8N427 588 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 CFAP61Q8NHU2 1237 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 MIPOL1Q8TD10 442 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 AGAP11Q8TF27 550 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 TMEM40Q8WWA1 233 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 NELFBQ8WX92 580 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 IQCDQ96DY2 449 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 RBM41Q96IZ5 413 aaKnown RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 PLEKHG4BQ96PX9 1271 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 CHP1Q99653 195 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 SEZ6LQ9BYH1 1024 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 CELF4Q9BZC1 486 aaKnown RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 GCOM2Q9BZD3 368 aaPredicted RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 PPP1R12CQ9BZL4 782 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 TBX20Q9UMR3 447 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 TRPV2Q9Y5S1 764 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 ZMYM2Q9UBW7 1377 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 TISP43B9A030 160 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 H0YCG3 227 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 PSMA7O14818 248 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 ZNF185O15231 689 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 EIF3DO15371 548 aaKnown RBP eCLIP12.17□□□□□ -0.46
CECR3-201ENST00000428828 CHRNA1P02708 482 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 CKBP12277 381 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 PTENP60484 403 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 PPP2R2AP63151 447 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 GTF2BQ00403 316 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 MBTD1Q05BQ5 628 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 SNX17Q15036 470 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 QPCTQ16769 361 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 TRIM71Q2Q1W2 868 aaKnown RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 LRRC23Q53EV4 343 aaPredicted RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 ANKRD33Q7Z3H0 272 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 TNS4Q8IZW8 715 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 SLC17A8Q8NDX2 589 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 ACCSQ96QU6 501 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 PRDM5Q9NQX1 630 aaPredicted RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 RWDD2AQ9UIY3 292 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 LUC7L2Q9Y383 392 aaKnown RBP12.17□□□□□ -0.46
CECR3-201ENST00000428828 UMODL1Q5DID0 1318 aa12.17□□□□□ -0.46
CECR3-201ENST00000428828 RNF225M0QZC1 329 aaPredicted RBP12.16□□□□□ -0.46
CECR3-201ENST00000428828 HNRNPDLO14979 420 aaKnown RBP12.16□□□□□ -0.46
CECR3-201ENST00000428828 B4GALT5O43286 388 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 SMIM24O75264 130 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 UBE4BO95155 1302 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 PYGLP06737 847 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 FAM163BP0C2L3 166 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms